RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 KLHL23Q8NBE8 558 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 BCL7CQ8WUZ0 217 aaPredicted RBP15.12■□□□□ 0.01
SDC2-203ENST00000519587 TATDN2Q93075 761 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 C17orf80Q9BSJ5 609 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 TTPALQ9BTX7 342 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 OXCT2Q9BYC2 517 aaPredicted RBP15.12■□□□□ 0.01
SDC2-203ENST00000519587 DNAJC12Q9UKB3 198 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 MTUS1Q9ULD2 1270 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 L1RE1Q9UN81 338 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 SSX2IPQ9Y2D8 614 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 FHOD1Q9Y613 1164 aa15.12■□□□□ 0.01
SDC2-203ENST00000519587 A0A1W2PQJ5 194 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 H7C4K7 107 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 LRRN2O75325 713 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 FGFR3P22607 806 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 WARSP23381 471 aaKnown RBP15.11■□□□□ 0.01
SDC2-203ENST00000519587 PCSK1P29120 753 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 GLUD2P49448 558 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 INCA1Q0VD86 236 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 SOWAHAQ2M3V2 549 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 WSCD1Q658N2 575 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 SCARA3Q6AZY7 606 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 IQCEQ6IPM2 695 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 ZNF280DQ6N043 979 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 CD300LGQ6UXG3 332 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 ANKS3Q6ZW76 656 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 TMC6Q7Z403 805 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 CEP57Q86XR8 500 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 GPR65Q8IYL9 337 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 THEM5Q8N1Q8 247 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 ARID3AQ99856 593 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 STK33Q9BYT3 514 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 GPR62Q9BZJ7 368 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 NUCKS1Q9H1E3 243 aaKnown RBP15.11■□□□□ 0.01
SDC2-203ENST00000519587 CISHQ9NSE2 258 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 MYO6Q9UM54 1294 aa15.11■□□□□ 0.01
SDC2-203ENST00000519587 COL4A4P53420 1690 aaPredicted RBP15.11■□□□□ 0.01
SDC2-203ENST00000519587 TMEM265A0A087WTH1 108 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 LPXNO60711 386 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 NOL4O94818 638 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 WEE2P0C1S8 567 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 KRT5P13647 590 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 CD58P19256 250 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 TKTP29401 623 aaKnown RBP15.1■□□□□ 0.01
SDC2-203ENST00000519587 RAP1GAPP47736 663 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 APBA1Q02410 837 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 ARHGAP44Q17R89 818 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 GJB7Q6PEY0 223 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 LIMS2Q7Z4I7 341 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 UNC93AQ86WB7 457 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 RNF168Q8IYW5 571 aaPredicted RBP15.1■□□□□ 0.01
SDC2-203ENST00000519587 VPS52Q8N1B4 723 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 OR6B3Q8NGW1 331 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 MYLIPQ8WY64 445 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 SHC3Q92529 594 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 ELMO3Q96BJ8 720 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 TNIP3Q96KP6 325 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 KREMEN1Q96MU8 473 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 NLRC4Q9NPP4 1024 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 RAPGEFL1Q9UHV5 662 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 BARX2Q9UMQ3 279 aaPredicted RBP15.1■□□□□ 0.01
SDC2-203ENST00000519587 LUC7L2Q9Y383 392 aaKnown RBP15.1■□□□□ 0.01
SDC2-203ENST00000519587 PCDHB4Q9Y5E5 795 aa15.1■□□□□ 0.01
SDC2-203ENST00000519587 A8MXQ7 604 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 F8VZ95 297 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 EPHB6O15197 1021 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 ARHGEF15O94989 841 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 EFEMP2O95967 443 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 CCDC172P0C7W6 258 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 IGFBP6P24592 240 aaPredicted RBP15.09■□□□□ 0.01
SDC2-203ENST00000519587 GNL1P36915 607 aaPredicted RBP15.09■□□□□ 0.01
SDC2-203ENST00000519587 USP8P40818 1118 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 STAT1P42224 750 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 TSPY1Q01534 308 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 DRAP1Q14919 205 aaPredicted RBP15.09■□□□□ 0.01
SDC2-203ENST00000519587 PTPN21Q16825 1174 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 VARS2Q5ST30 1063 aaKnown RBP15.09■□□□□ 0.01
SDC2-203ENST00000519587 PDE12Q6L8Q7 609 aaKnown RBP15.09■□□□□ 0.01
SDC2-203ENST00000519587 DPY19L2P1Q6NXN4 242 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 CNGA4Q8IV77 575 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 RIN2Q8WYP3 895 aaPredicted RBP15.09■□□□□ 0.01
SDC2-203ENST00000519587 PIK3R5Q8WYR1 880 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 NT5C1AQ9BXI3 368 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 NAA15Q9BXJ9 866 aaKnown RBP15.09■□□□□ 0.01
SDC2-203ENST00000519587 TTYH3Q9C0H2 523 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 LMAN2LQ9H0V9 348 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 ENTPD7Q9NQZ7 604 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.09■□□□□ 0.01
SDC2-203ENST00000519587 MRPL17Q9NRX2 175 aaKnown RBP15.09■□□□□ 0.01
SDC2-203ENST00000519587 DDX43Q9NXZ2 648 aaKnown RBP15.09■□□□□ 0.01
SDC2-203ENST00000519587 IMPACTQ9P2X3 320 aa15.09■□□□□ 0.01
SDC2-203ENST00000519587 TIMM13Q9Y5L4 95 aaPredicted RBP15.09■□□□□ 0.01
SDC2-203ENST00000519587 OR6C75A6NL08 312 aa15.08■□□□□ 0
SDC2-203ENST00000519587 H3BNC9 293 aa15.08■□□□□ 0
SDC2-203ENST00000519587 TNFRSF10AO00220 468 aa15.08■□□□□ 0
SDC2-203ENST00000519587 GABRDO14764 452 aa15.08■□□□□ 0
SDC2-203ENST00000519587 CILPO75339 1184 aa15.08■□□□□ 0
SDC2-203ENST00000519587 OAZ2O95190 189 aa15.08■□□□□ 0
SDC2-203ENST00000519587 GYPCP04921 128 aa15.08■□□□□ 0
SDC2-203ENST00000519587 PLA2G5P39877 138 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms