RNA–Protein interactions for RNA: ENST00000516538.1

RNU6-1046P-201, Transcript of RNA, U6 small nuclear 1046, pseudogene, humanhuman

BASIC

Gene RNU6-1046P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1046P-201ENST00000516538 CERKLQ49MI3 558 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1046P-201ENST00000516538 NAALADL2Q58DX5 795 aa3.34□□□□□ -1.87
RNU6-1046P-201ENST00000516538 CNNM4Q6P4Q7 775 aa3.34□□□□□ -1.87
RNU6-1046P-201ENST00000516538 C9orf47Q6ZRZ4 202 aa3.34□□□□□ -1.87
RNU6-1046P-201ENST00000516538 LRRTM3Q86VH5 581 aa3.34□□□□□ -1.87
RNU6-1046P-201ENST00000516538 ADHFE1Q8IWW8 467 aa3.34□□□□□ -1.87
RNU6-1046P-201ENST00000516538 AOPEPQ8N6M6 819 aa3.34□□□□□ -1.87
RNU6-1046P-201ENST00000516538 RBMXL3Q8N7X1 1067 aaKnown RBP3.34□□□□□ -1.87
RNU6-1046P-201ENST00000516538 C8orf58Q8NAV2 365 aa3.34□□□□□ -1.87
RNU6-1046P-201ENST00000516538 CCHCR1Q8TD31 782 aa3.34□□□□□ -1.87
RNU6-1046P-201ENST00000516538 EMC7Q9NPA0 242 aa3.34□□□□□ -1.87
RNU6-1046P-201ENST00000516538 SCOCQ9UIL1 159 aa3.34□□□□□ -1.87
RNU6-1046P-201ENST00000516538 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.34□□□□□ -1.87
RNU6-1046P-201ENST00000516538 WDR17Q8IZU2 1322 aa3.34□□□□□ -1.87
RNU6-1046P-201ENST00000516538 F5H697 171 aa3.33□□□□□ -1.88
RNU6-1046P-201ENST00000516538 ASMTLO95671 621 aa3.33□□□□□ -1.88
RNU6-1046P-201ENST00000516538 FHL3Q13643 280 aa3.33□□□□□ -1.88
RNU6-1046P-201ENST00000516538 TBCCQ15814 346 aa3.33□□□□□ -1.88
RNU6-1046P-201ENST00000516538 MUM1Q2TAK8 710 aa3.33□□□□□ -1.88
RNU6-1046P-201ENST00000516538 UTP14CQ5TAP6 766 aaKnown RBP3.33□□□□□ -1.88
RNU6-1046P-201ENST00000516538 GSG1LQ6UXU4 331 aa3.33□□□□□ -1.88
RNU6-1046P-201ENST00000516538 FAM9AQ8IZU1 332 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1046P-201ENST00000516538 TSPEARQ8WU66 669 aa3.33□□□□□ -1.88
RNU6-1046P-201ENST00000516538 SMOQ99835 787 aa3.33□□□□□ -1.88
RNU6-1046P-201ENST00000516538 TRMOQ9BU70 441 aa3.33□□□□□ -1.88
RNU6-1046P-201ENST00000516538 ACTRT3Q9BYD9 372 aa3.33□□□□□ -1.88
RNU6-1046P-201ENST00000516538 DMRT3Q9NQL9 472 aa3.33□□□□□ -1.88
RNU6-1046P-201ENST00000516538 SPATA31A3Q5VYP0 1347 aa3.33□□□□□ -1.88
RNU6-1046P-201ENST00000516538 USP1O94782 785 aa3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 EEFSECP57772 596 aaKnown RBP3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 KRTAP10-5P60370 271 aa3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 POU6F2P78424 691 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 MGAT2Q10469 447 aa3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 MALLQ13021 153 aa3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 PDCD1Q15116 288 aa3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 RBMS2Q15434 407 aaKnown RBP3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 ATP13A4Q4VNC1 1196 aa3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 ZNF618Q5T7W0 954 aa3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 TAPT1Q6NXT6 567 aa3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 WDR53Q7Z5U6 358 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 CFAP52Q8N1V2 620 aa3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 OSBPL9Q96SU4 736 aa3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 PACSIN1Q9BY11 444 aa3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 CCDC9Q9Y3X0 531 aaKnown RBP3.32□□□□□ -1.88
RNU6-1046P-201ENST00000516538 MYBBP1AQ9BQG0 1328 aaKnown RBP3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 H3BNX3 289 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 NEMP1O14524 444 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 ZNF213O14771 459 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 IL1R2P27930 398 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 NDUFV1P49821 464 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 CTXN1P60606 82 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 HOXA4Q00056 320 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 RHDQ02161 417 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 PPP3CAQ08209 521 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 RBL2Q08999 1139 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 SQSTM1Q13501 440 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 DGKKQ5KSL6 1271 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 CHSY1Q86X52 802 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 NSUN7Q8NE18 718 aaKnown RBP3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 COQ8BQ96D53 544 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 RNPC3Q96LT9 517 aaKnown RBP3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 KLHL32Q96NJ5 620 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 TRIB1Q96RU8 372 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 IMPG2Q9BZV3 1241 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 QRSL1Q9H0R6 528 aaKnown RBP3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 FOXP1Q9H334 677 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 POT1Q9NUX5 634 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 KLHL13Q9P2N7 655 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 SQORQ9Y6N5 450 aa3.31□□□□□ -1.88
RNU6-1046P-201ENST00000516538 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 H0YIZ8 118 aa3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 DSCR3O14972 297 aa3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 SMAD6O43541 496 aaKnown RBP3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 ULK1O75385 1050 aa3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 SOAT2O75908 522 aa3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 ABLIM3O94929 683 aa3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 CRYABP02511 175 aaKnown RBP3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 PCSK6P29122 969 aa3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 SLC6A9P48067 706 aa3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 SESN3P58005 492 aa3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 PCBP1Q15365 356 aaKnown RBP eCLIP3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 TCEA2Q15560 299 aa3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 PABPC1LQ4VXU2 614 aaKnown RBP3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 PCID2Q5JVF3 399 aa3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 TRIM72Q6ZMU5 477 aa3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 TMPRSS9Q7Z410 1059 aa3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 KLHDC4Q8TBB5 520 aa3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 TOPORSQ9NS56 1045 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 JKAMPQ9P055 326 aa3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 DKK3Q9UBP4 350 aa3.3□□□□□ -1.88
RNU6-1046P-201ENST00000516538 LY6G6EA0A0G2JKS1 128 aa3.29□□□□□ -1.88
RNU6-1046P-201ENST00000516538 GRM6O15303 877 aa3.29□□□□□ -1.88
RNU6-1046P-201ENST00000516538 AMY1AP04745 511 aa3.29□□□□□ -1.88
RNU6-1046P-201ENST00000516538 PRF1P14222 555 aa3.29□□□□□ -1.88
RNU6-1046P-201ENST00000516538 JUPP14923 745 aa3.29□□□□□ -1.88
RNU6-1046P-201ENST00000516538 ATP5F1P24539 256 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1046P-201ENST00000516538 CYP2C18P33260 490 aa3.29□□□□□ -1.88
RNU6-1046P-201ENST00000516538 SLC5A3P53794 718 aa3.29□□□□□ -1.88
RNU6-1046P-201ENST00000516538 ATP8B2P98198 1209 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms