RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 GALNT15Q8N3T1 639 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 SLC15A4Q8N697 577 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 ZFP28Q8NHY6 868 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 SNX27Q96L92 541 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 LSM14BQ9BX40 385 aaKnown RBP6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 NELFAQ9H3P2 528 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 AGO3Q9H9G7 860 aaKnown RBP6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 SEC61A2Q9H9S3 476 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 NCDNQ9UBB6 729 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 XPR1Q9UBH6 696 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 AGAP1Q9UPQ3 857 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 ZDHHC9Q9Y397 364 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 KCTD3Q9Y597 815 aa6.44□□□□□ -1.38
HMGB1P47-201ENST00000511281 TMEM233B4DJY2 109 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 E9PLN8 166 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 MYO1CO00159 1063 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 RFXAPO00287 272 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 NDST3O95803 873 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 ACVR2AP27037 513 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 PTTG1IPP53801 180 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 PSMC1P62191 440 aaKnown RBP6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 TBX2Q13207 712 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 POSTNQ15063 836 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 CSRP2Q16527 193 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 JAKMIP3Q5VZ66 844 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 MFSD5Q6N075 450 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 BORAQ6PGQ7 559 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 FBXO38Q6PIJ6 1188 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 FITM2Q8N6M3 262 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 LINC01356Q8N9X3 169 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 ATG16L2Q8NAA4 619 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 TP53I13Q8NBR0 393 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 TMIEQ8NEW7 156 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 UBXN10Q96LJ8 280 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 KLHL32Q96NJ5 620 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 VKORC1Q9BQB6 163 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 MESP1Q9BRJ9 268 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 PAGR1Q9BTK6 254 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 CNPPD1Q9BV87 410 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 CPEB1Q9BZB8 566 aaKnown RBP6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 GSTO2Q9H4Y5 243 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 CD320Q9NPF0 282 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 IGSF9Q9P2J2 1179 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 MID2Q9UJV3 735 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 ITGB1BP2Q9UKP3 347 aa6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 CNOT6Q9ULM6 557 aaKnown RBP6.43□□□□□ -1.38
HMGB1P47-201ENST00000511281 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 LOC102723971A0A1B0GUV8 181 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 A0A1W2PRX2 142 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 IRAK2O43187 625 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 STC2O76061 302 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 AGFG2O95081 481 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 IDEP14735 1019 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 EGR1P18146 543 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 IRAK1P51617 712 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 POLE2P56282 527 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 RAC3P60763 192 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 GRM1Q13255 1194 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 SIM2Q14190 667 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 NPY5RQ15761 445 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 MAPKAPK3Q16644 382 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 ZNF385BQ569K4 471 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 ATXN7L2Q5T6C5 722 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 INTS11Q5TA45 600 aaKnown RBP6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 FCRL6Q6DN72 434 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 JMJD6Q6NYC1 403 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 GGT6Q6P531 493 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 MZT2AQ6P582 158 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 FAM111BQ6SJ93 734 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 FAM83AQ86UY5 434 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 PCSK9Q8NBP7 692 aaKnown RBP6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 BHLHE22Q8NFJ8 381 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 NUP133Q8WUM0 1156 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 USP13Q92995 863 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 MPP4Q96JB8 637 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 ZNF512Q96ME7 567 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 PPM1MQ96MI6 270 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 MOGAT1Q96PD6 335 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 KATNAL1Q9BW62 490 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 STK31Q9BXU1 1019 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 KRTAP4-6Q9BYQ5 205 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 HEYLQ9NQ87 328 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 HESX1Q9UBX0 185 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 CA14Q9ULX7 337 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 OAZ3Q9UMX2 235 aa6.42□□□□□ -1.38
HMGB1P47-201ENST00000511281 CDHR4A6H8M9 788 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 AQP12BA6NM10 295 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 IPO5O00410 1097 aaKnown RBP6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 B4GALT3O60512 393 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 GLP2RO95838 553 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 MAPK9P45984 424 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 KIAA2012Q0VF49 1180 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 SLC29A2Q14542 456 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 TRIM71Q2Q1W2 868 aaKnown RBP6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 LIN54Q6MZP7 749 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 FAM124AQ86V42 546 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 ZFPM1Q8IX07 1006 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 MPP5Q8N3R9 675 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 NAXEQ8NCW5 288 aa6.41□□□□□ -1.38
HMGB1P47-201ENST00000511281 CCDC150Q8NCX0 1101 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms