RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 SLC39A14Q15043 492 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 ARHGAP15Q53QZ3 475 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 WSCD1Q658N2 575 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 CRELD2Q6UXH1 353 aaPredicted RBP16.62■□□□□ 0.25
TPM3-219ENST00000509409 TMC8Q8IU68 726 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 TTC9BQ8N6N2 239 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 OR10T2Q8NGX3 314 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 CSGALNACT1Q8TDX6 532 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 CACTINQ8WUQ7 758 aaKnown RBP16.62■□□□□ 0.25
TPM3-219ENST00000509409 ATRIPQ8WXE1 791 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 FAM3CQ92520 227 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 CLDN23Q96B33 292 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 DNAJC19Q96DA6 116 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 SAAL1Q96ER3 474 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 INTS4Q96HW7 963 aaKnown RBP16.62■□□□□ 0.25
TPM3-219ENST00000509409 USP28Q96RU2 1077 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 LRRC3Q9BY71 257 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 ZSCAN16Q9H4T2 348 aaPredicted RBP16.62■□□□□ 0.25
TPM3-219ENST00000509409 PANK4Q9NVE7 773 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 MYH15Q9Y2K3 1946 aa16.62■□□□□ 0.25
TPM3-219ENST00000509409 KPNA7A9QM74 516 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 LDHAP00338 332 aaKnown RBP16.61■□□□□ 0.25
TPM3-219ENST00000509409 GABRR2P28476 465 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 RPS9P46781 194 aaKnown RBP16.61■□□□□ 0.25
TPM3-219ENST00000509409 STK38Q15208 465 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 ZNF528Q3MIS6 628 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 SV2CQ496J9 727 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 GPR158Q5T848 1215 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 NT5DC4Q86YG4 428 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 ARID3BQ8IVW6 561 aaPredicted RBP16.61■□□□□ 0.25
TPM3-219ENST00000509409 EFCAB13Q8IY85 973 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 DCP1BQ8IZD4 617 aaKnown RBP16.61■□□□□ 0.25
TPM3-219ENST00000509409 PDILTQ8N807 584 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 GIPC2Q8TF65 315 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 PSMG2Q969U7 264 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 ZNF560Q96MR9 790 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 LPIN3Q9BQK8 851 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 STRA6Q9BX79 667 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 ZCWPW1Q9H0M4 648 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 LMAN1LQ9HAT1 526 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 AGAP1Q9UPQ3 857 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 MTMR6Q9Y217 621 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 PIAS3Q9Y6X2 628 aa16.61■□□□□ 0.25
TPM3-219ENST00000509409 GOLGA8IPA6NC78 632 aa16.6■□□□□ 0.25
TPM3-219ENST00000509409 GOLGA8JA6NMD2 632 aa16.6■□□□□ 0.25
TPM3-219ENST00000509409 STX6O43752 255 aa16.6■□□□□ 0.25
TPM3-219ENST00000509409 PPP1R37O75864 691 aa16.6■□□□□ 0.25
TPM3-219ENST00000509409 ID4P47928 161 aa16.6■□□□□ 0.25
TPM3-219ENST00000509409 KPNA1P52294 538 aaPredicted RBP16.6■□□□□ 0.25
TPM3-219ENST00000509409 SMARCB1Q12824 385 aa16.6■□□□□ 0.25
TPM3-219ENST00000509409 STXBP5Q5T5C0 1151 aa16.6■□□□□ 0.25
TPM3-219ENST00000509409 GAREM2Q75VX8 874 aa16.6■□□□□ 0.25
TPM3-219ENST00000509409 KIAA2013Q8IYS2 634 aa16.6■□□□□ 0.25
TPM3-219ENST00000509409 GCNAQ96QF7 691 aa16.6■□□□□ 0.25
TPM3-219ENST00000509409 PCIF1Q9H4Z3 704 aa16.6■□□□□ 0.25
TPM3-219ENST00000509409 TRPV5Q9NQA5 729 aa16.6■□□□□ 0.25
TPM3-219ENST00000509409 ABI2Q9NYB9 513 aaPredicted RBP16.6■□□□□ 0.25
TPM3-219ENST00000509409 HSFX1Q9UBD0 423 aa16.6■□□□□ 0.25
TPM3-219ENST00000509409 FAM186AA6NE01 2351 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 PRPF6O94906 941 aaKnown RBP16.59■□□□□ 0.25
TPM3-219ENST00000509409 GARTP22102 1010 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 CCNE1P24864 410 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 POLR2BP30876 1174 aaKnown RBP16.59■□□□□ 0.25
TPM3-219ENST00000509409 PNPLA4P41247 253 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 MTAPQ13126 283 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 FZD5Q13467 585 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 ALCAMQ13740 583 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 TSSK4Q6SA08 328 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 LRRTM3Q86VH5 581 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 CCDC65Q8IXS2 484 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 CSGALNACT2Q8N6G5 542 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 ZSWIM2Q8NEG5 633 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 SPPL2BQ8TCT7 592 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 C2orf15Q8WU43 125 aaKnown RBP16.59■□□□□ 0.25
TPM3-219ENST00000509409 RUBCNQ92622 972 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 BORCS6Q96GS4 357 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 TMEM206Q9H813 350 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 OLFML3Q9NRN5 406 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 ZSCAN32Q9NX65 697 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 RBAKQ9NYW8 714 aaPredicted RBP16.59■□□□□ 0.25
TPM3-219ENST00000509409 R3HCC1Q9Y3T6 440 aaKnown RBP16.59■□□□□ 0.25
TPM3-219ENST00000509409 COL4A3Q01955 1670 aa16.59■□□□□ 0.25
TPM3-219ENST00000509409 A0A087X0B3 334 aa16.58■□□□□ 0.24
TPM3-219ENST00000509409 SHISA7A6NL88 538 aa16.58■□□□□ 0.24
TPM3-219ENST00000509409 K7ELQ4 463 aaPredicted RBP16.58■□□□□ 0.24
TPM3-219ENST00000509409 CHADO15335 359 aa16.58■□□□□ 0.24
TPM3-219ENST00000509409 HUS1O60921 280 aa16.58■□□□□ 0.24
TPM3-219ENST00000509409 ITGB3P05106 788 aa16.58■□□□□ 0.24
TPM3-219ENST00000509409 KRT19P08727 400 aa16.58■□□□□ 0.24
TPM3-219ENST00000509409 CDC25CP30307 473 aa16.58■□□□□ 0.24
TPM3-219ENST00000509409 CASP5P51878 434 aa16.58■□□□□ 0.24
TPM3-219ENST00000509409 CYP4F8P98187 520 aa16.58■□□□□ 0.24
TPM3-219ENST00000509409 TSPY1Q01534 308 aa16.58■□□□□ 0.24
TPM3-219ENST00000509409 BFSP1Q12934 665 aa16.58■□□□□ 0.24
TPM3-219ENST00000509409 BRSK2Q8IWQ3 736 aa16.58■□□□□ 0.24
TPM3-219ENST00000509409 TTC8Q8TAM2 541 aa16.58■□□□□ 0.24
TPM3-219ENST00000509409 RSPRY1Q96DX4 576 aa16.58■□□□□ 0.24
TPM3-219ENST00000509409 ZNF396Q96N95 335 aaPredicted RBP16.58■□□□□ 0.24
TPM3-219ENST00000509409 BACH2Q9BYV9 841 aa16.58■□□□□ 0.24
TPM3-219ENST00000509409 LRRC27Q9C0I9 530 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms