RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 DDX19AQ9NUU7 478 aaKnown RBP6.53□□□□□ -1.36
CLCN3-204ENST00000504131 HSPBP1Q9NZL4 362 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 ZSWIM5Q9P217 1185 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 POTECB2RU33 542 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 RNF103O00237 685 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 ADCY6O43306 1168 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 SUN1O94901 812 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 SCAF4O95104 1147 aaKnown RBP6.53□□□□□ -1.36
CLCN3-204ENST00000504131 ZWINTO95229 277 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 DLGAP3O95886 979 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 P4HBP07237 508 aaKnown RBP6.53□□□□□ -1.36
CLCN3-204ENST00000504131 POLR2MP0CAP2 368 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 ZCCHC18P0CG32 403 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 CHN1P15882 459 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 MCM7P33993 719 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 PHKA1P46020 1223 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 UBE2HP62256 183 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 IL1RL1Q01638 556 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 GUCY1A3Q02108 690 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 PCDH1Q08174 1060 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 SPIDRQ14159 915 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 CDKL3Q8IVW4 592 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-204ENST00000504131 MAPKAPK5Q8IW41 473 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 MICU2Q8IYU8 434 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 AVL9Q8NBF6 648 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 KAT2BQ92831 832 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 C7orf25Q9BPX7 421 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 PAIP1Q9H074 479 aaKnown RBP6.53□□□□□ -1.36
CLCN3-204ENST00000504131 MMRN2Q9H8L6 949 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 SARS2Q9NP81 518 aaKnown RBP6.53□□□□□ -1.36
CLCN3-204ENST00000504131 ZNF224Q9NZL3 707 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 TBC1D14Q9P2M4 693 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 HERC5Q9UII4 1024 aaKnown RBP6.53□□□□□ -1.36
CLCN3-204ENST00000504131 STOML2Q9UJZ1 356 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 G3V3G9 751 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 SMPD2O60906 423 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 OR7A10O76100 309 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 SRGAP2CP0DJJ0 459 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 FDX1P10109 184 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 CRABP2P29373 138 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 CASP14P31944 242 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 NOS2P35228 1153 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 MOGQ16653 247 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 TMEM67Q5HYA8 995 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 RNF219Q5W0B1 726 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-204ENST00000504131 DENND2CQ68D51 928 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 PGBD3Q8N328 593 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 CAMKK1Q8N5S9 505 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 KDM1BQ8NB78 822 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 USP7Q93009 1102 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 HS6ST2Q96MM7 605 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 AIFM3Q96NN9 605 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 NLRP3Q96P20 1036 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 PFDN5Q99471 154 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 KLHL1Q9NR64 748 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 NFKBIL1Q9UBC1 381 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-204ENST00000504131 A0A1B0GVG6 124 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 A0A1B0GW55 424 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 NDUFS8O00217 210 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 IRS4O14654 1257 aaPredicted RBP6.52□□□□□ -1.36
CLCN3-204ENST00000504131 HSPA12AO43301 675 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 NIPSNAP2O75323 286 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 ASMTLO95671 621 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 DUX4L2P0CJ85 424 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 DUX4L3P0CJ86 424 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 DUX4L4P0CJ87 422 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 DUX4L5P0CJ88 424 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 DUX4L6P0CJ89 424 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 DUX4L7P0CJ90 424 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 CFL1P23528 166 aaKnown RBP6.52□□□□□ -1.36
CLCN3-204ENST00000504131 PTPN9P43378 593 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 MAPK10P53779 464 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 SPDYCQ5MJ68 293 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 RNF220Q5VTB9 566 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 SPATA2LQ8IUW3 424 aaPredicted RBP6.52□□□□□ -1.36
CLCN3-204ENST00000504131 P3H2Q8IVL5 708 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 MICALL2Q8IY33 904 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 FAM216AQ8WUB2 273 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 CHID1Q9BWS9 393 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 IL20Q9NYY1 176 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 DUX4Q9UBX2 424 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 CFL2Q9Y281 166 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 COQ6Q9Y2Z9 468 aa6.52□□□□□ -1.36
CLCN3-204ENST00000504131 GCC2Q8IWJ2 1684 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 RAPGEF6Q8TEU7 1601 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 TNPO2O14787 897 aaKnown RBP6.52□□□□□ -1.37
CLCN3-204ENST00000504131 AKR1B1P15121 316 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 PRKCAP17252 672 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 TNNI3P19429 210 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 HNF1AP20823 631 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 STX2P32856 288 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 SCNN1AP37088 669 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 SERPINH1P50454 418 aaKnown RBP6.52□□□□□ -1.37
CLCN3-204ENST00000504131 HTRA4P83105 476 aaPredicted RBP6.52□□□□□ -1.37
CLCN3-204ENST00000504131 E2F2Q14209 437 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 C1orf141Q5JVX7 400 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 C3orf33Q6P1S2 294 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 COMTD1Q86VU5 262 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 LRRC34Q8IZ02 419 aa6.52□□□□□ -1.37
CLCN3-204ENST00000504131 CNTROBQ8N137 903 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms