RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 SLC39A12Q504Y0 691 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 L1TD1Q5T7N2 865 aaKnown RBP12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 FAM173BQ6P4H8 233 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 VITQ6UXI7 678 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 YAF2Q8IY57 180 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 SYCP3Q8IZU3 236 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 PDCD7Q8N8D1 485 aaKnown RBP12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 ATAD1Q8NBU5 361 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 SHKBP1Q8TBC3 707 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 FAM200AQ8TCP9 573 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 CLDN23Q96B33 292 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 PYM1Q9BRP8 204 aaKnown RBP12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 TRPV5Q9NQA5 729 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 WDR70Q9NW82 654 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 TBC1D7Q9P0N9 293 aa12.71□□□□□ -0.37
NUDCD3-211ENST00000497978 FAM186AA6NE01 2351 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 A0A1W2PRU2 124 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 KINO60870 393 aaKnown RBP12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 LDHAP00338 332 aaKnown RBP12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 TARSP26639 723 aaKnown RBP12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 PNPLA4P41247 253 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 VIPR2P41587 438 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 CSTF1Q05048 431 aaKnown RBP12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 SLC39A14Q15043 492 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 TAF12Q16514 161 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 SV2CQ496J9 727 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 ARHGAP15Q53QZ3 475 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 DNAJB7Q7Z6W7 309 aaPredicted RBP12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 TMC8Q8IU68 726 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 MFSD6LQ8IWD5 586 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 C2orf15Q8WU43 125 aaKnown RBP12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 CACTINQ8WUQ7 758 aaKnown RBP12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 PSMG2Q969U7 264 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 DNAJC19Q96DA6 116 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 ZNF560Q96MR9 790 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 TMEM209Q96SK2 561 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 SEPT5Q99719 369 aaPredicted RBP12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 HINFPQ9BQA5 517 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 FAM213AQ9BRX8 229 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 DNAJC25Q9H1X3 360 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 CRISPLD1Q9H336 500 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 OCEL1Q9H607 264 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 ZNF334Q9HCZ1 680 aaPredicted RBP12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 OLFML3Q9NRN5 406 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 NDRG2Q9UN36 371 aaKnown RBP12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 MORC2Q9Y6X9 1032 aaPredicted RBP12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 ANK1P16157 1881 aa12.7□□□□□ -0.38
NUDCD3-211ENST00000497978 CACNA1IQ9P0X4 2223 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 HEPACAM2A8MVW5 462 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 KPNA7A9QM74 516 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 NRG2O14511 850 aaPredicted RBP12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 DPYSL4O14531 572 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 STX6O43752 255 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 GARTP22102 1010 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 ADSSP30520 456 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 MGAT5BQ3V5L5 792 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 CRELD2Q6UXH1 353 aaPredicted RBP12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 DCP1BQ8IZD4 617 aaKnown RBP12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 MAML2Q8IZL2 1156 aaPredicted RBP12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 TTC9BQ8N6N2 239 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 OR10T2Q8NGX3 314 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 CSGALNACT1Q8TDX6 532 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 ATRIPQ8WXE1 791 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 FAM3CQ92520 227 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 GCNAQ96QF7 691 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 USP28Q96RU2 1077 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 STRA6Q9BX79 667 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 LRRC3Q9BY71 257 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 PANK2Q9BZ23 570 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 LRRC27Q9C0I9 530 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 ZCWPW1Q9H0M4 648 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 IKZF4Q9H2S9 585 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 ATXN3LQ9H3M9 355 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 TMEM206Q9H813 350 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 PANK4Q9NVE7 773 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 MTMR6Q9Y217 621 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 PIAS3Q9Y6X2 628 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 COL4A3Q01955 1670 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 RIF1Q5UIP0 2472 aaKnown RBP12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 SCN1AP35498 2009 aa12.69□□□□□ -0.38
NUDCD3-211ENST00000497978 TCHHQ07283 1943 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 TSC2P49815 1807 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 PATJQ8NI35 1801 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 K7ELQ4 463 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 SOAT2O75908 522 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 GABRR2P28476 465 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 CDC25CP30307 473 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 MLLT6P55198 1093 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 TFAMQ00059 246 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 KCNA1Q09470 495 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 PPP2R5DQ14738 602 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 STK38Q15208 465 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 GPR158Q5T848 1215 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 WSCD1Q658N2 575 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 C1orf228Q6PIY5 440 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 STXBP4Q6ZWJ1 553 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 GAREM2Q75VX8 874 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 ARID3BQ8IVW6 561 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 BRSK2Q8IWQ3 736 aa12.68□□□□□ -0.38
NUDCD3-211ENST00000497978 CCDC65Q8IXS2 484 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms