RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 CPA4Q9UI42 421 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 USP19O94966 1318 aa3.63□□□□□ -1.83
R3HDM1-219ENST00000488035 COL11A2P13942 1736 aaPredicted RBP3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 CFAP69A5D8W1 941 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 DRGXA6NNA5 263 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 PRR5-ARHGAP8B1AHC4 643 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 PMM2O15305 246 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 TEX33O43247 280 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 HRGP04196 525 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 SMARCA1P28370 1054 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 BMPR1AP36894 532 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 PIK3CGP48736 1102 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 NEK3P51956 506 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 CHN2P52757 468 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 CREMQ03060 361 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 VPS72Q15906 364 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 SYCP2LQ5T4T6 812 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 RNF220Q5VTB9 566 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 IL31Q6EBC2 164 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 CCSAPQ6IQ19 270 aaPredicted RBP3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 SRGAP1Q7Z6B7 1085 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 CCAR1Q8IX12 1150 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 SRRM1Q8IYB3 904 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 FAM98AQ8NCA5 519 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 TMIEQ8NEW7 156 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 PJA1Q8NG27 643 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 OR10H5Q8NGA6 315 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 IL31RAQ8NI17 732 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 CAGE1Q8TC20 777 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 PHACTR3Q96KR7 559 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 P2RX7Q99572 595 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 TEX101Q9BY14 249 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 WDCPQ9H6R7 721 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 VSX1Q9NZR4 365 aaPredicted RBP3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 AGAP1Q9UPQ3 857 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 CLCA2Q9UQC9 943 aa3.62□□□□□ -1.83
R3HDM1-219ENST00000488035 PIPSLA2A3N6 862 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 E9PLN8 166 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 TBX3O15119 743 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 SLC43A1O75387 559 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 HAUS5O94927 633 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 AGFG2O95081 481 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 ARIH2O95376 493 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 POMCP01189 267 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 MYL1P05976 194 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 MYL3P08590 195 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 PEX2P28328 305 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 APOBEC3AP31941 199 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 SOX8P57073 446 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 PSMC1P62191 440 aaKnown RBP3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 NOMO3P69849 1222 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 GUCY1B3Q02153 619 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 NHLH1Q02575 133 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 SLFN5Q08AF3 891 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 FGL2Q14314 439 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 SAFBQ15424 915 aaKnown RBP eCLIP3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 NOMO2Q5JPE7 1267 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 KHDC1LQ5JSQ8 128 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 FAM102AQ5T9C2 384 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 UTP14CQ5TAP6 766 aaKnown RBP3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 ABHD17BQ5VST6 288 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 SP5Q6BEB4 398 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 EFCAB12Q6NXP0 572 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 ZNF365Q70YC5 407 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 MED25Q71SY5 747 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 GDF7Q7Z4P5 450 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 ZFP28Q8NHY6 868 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 PARD3BQ8TEW8 1205 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 LRTOMTQ8WZ04 291 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 ANKS1AQ92625 1134 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 FAM167AQ96KS9 214 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 KLHL32Q96NJ5 620 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 VKORC1Q9BQB6 163 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 NAA15Q9BXJ9 866 aaKnown RBP3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 TLR10Q9BXR5 811 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 PACSIN1Q9BY11 444 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 STK32BQ9NY57 414 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 TRPM5Q9NZQ8 1165 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 POGKQ9P215 609 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 RNF7Q9UBF6 113 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 TLK1Q9UKI8 766 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 HDAC5Q9UQL6 1122 aa3.61□□□□□ -1.83
R3HDM1-219ENST00000488035 A0A1W2PPL8 197 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 ZNF785A8K8V0 405 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 DIRC3C9JPN6 131 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 MYO1FO00160 1098 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 GOLIM4O00461 696 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 NDUFA10O95299 355 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 ESRRBO95718 433 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 HLA-DOAP06340 250 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 GJB1P08034 283 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 FTH1P19P0C7X4 201 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 MTHFD1P11586 935 aaKnown RBP3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 FCER1AP12319 257 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 FAM193AP78312 1265 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 GPSM2P81274 684 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 FAM189BP81408 668 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 NHLH2Q02577 135 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 FOXF2Q12947 444 aa3.6□□□□□ -1.83
R3HDM1-219ENST00000488035 HLTFQ14527 1009 aaKnown RBP eCLIP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms