RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 C1orf162Q8NEQ5 155 aaPredicted RBP8.05□□□□□ -1.12
CBX3-206ENST00000481057 AUTS2Q8WXX7 1259 aa8.05□□□□□ -1.12
CBX3-206ENST00000481057 ALG13Q9NP73 1137 aaKnown RBP8.05□□□□□ -1.12
CBX3-206ENST00000481057 DNAJC28Q9NX36 388 aa8.05□□□□□ -1.12
CBX3-206ENST00000481057 RTEL1Q9NZ71 1219 aa8.05□□□□□ -1.12
CBX3-206ENST00000481057 NR2E1Q9Y466 385 aa8.05□□□□□ -1.12
CBX3-206ENST00000481057 SPTBN2O15020 2390 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 A0A0G2JMZ2 1700 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 TNPO2O14787 897 aaKnown RBP8.04□□□□□ -1.12
CBX3-206ENST00000481057 RNMTO43148 476 aaKnown RBP8.04□□□□□ -1.12
CBX3-206ENST00000481057 PRICKLE3O43900 615 aaPredicted RBP8.04□□□□□ -1.12
CBX3-206ENST00000481057 MTHFD2P13995 350 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 MTNR1BP49286 362 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 NRG3P56975 720 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 EIF4A2Q14240 407 aaKnown RBP8.04□□□□□ -1.12
CBX3-206ENST00000481057 MUM1Q2TAK8 710 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 FBLN7Q53RD9 439 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 GLB1L2Q8IW92 636 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 UNC5BQ8IZJ1 945 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 OR14K1Q8NGZ2 314 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 TSPEARQ8WU66 669 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 CFHR4Q92496 578 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 SLC7A6OSQ96CW6 309 aaPredicted RBP8.04□□□□□ -1.12
CBX3-206ENST00000481057 SMAD5Q99717 465 aaKnown RBP8.04□□□□□ -1.12
CBX3-206ENST00000481057 MEGF9Q9H1U4 602 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 TLR9Q9NR96 1032 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 ATP11BQ9Y2G3 1177 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 TRIOO75962 3097 aa8.04□□□□□ -1.12
CBX3-206ENST00000481057 C2orf78A6NCI8 922 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 PDHXO00330 501 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 MATN2O00339 956 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 LY86O95711 162 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 PDGFRBP09619 1106 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 MYBL2P10244 700 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 GAAP10253 952 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 MGAT5Q09328 741 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 SNAPC2Q13487 334 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 UBXN11Q5T124 520 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 LCE3BQ5TA77 95 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 SUSD4Q5VX71 490 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 AMOTL1Q8IY63 956 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 PLA2G15Q8NCC3 412 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 PIK3C3Q8NEB9 887 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 GCDHQ92947 438 aaPredicted RBP8.03□□□□□ -1.12
CBX3-206ENST00000481057 NEIL1Q96FI4 390 aaPredicted RBP8.03□□□□□ -1.12
CBX3-206ENST00000481057 FSD1Q9BTV5 496 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 SEC61A2Q9H9S3 476 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 JADE2Q9NQC1 790 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 RBM8AQ9Y5S9 174 aaKnown RBP8.03□□□□□ -1.12
CBX3-206ENST00000481057 MTCH2Q9Y6C9 303 aa8.03□□□□□ -1.12
CBX3-206ENST00000481057 OTOFQ9HC10 1997 aa8.02□□□□□ -1.12
CBX3-206ENST00000481057 TRIM43BA6NCK2 446 aa8.02□□□□□ -1.13
CBX3-206ENST00000481057 DAPK3O43293 454 aa8.02□□□□□ -1.13
CBX3-206ENST00000481057 PLATP00750 562 aa8.02□□□□□ -1.13
CBX3-206ENST00000481057 CFBP00751 764 aa8.02□□□□□ -1.13
CBX3-206ENST00000481057 RAC3P60763 192 aa8.02□□□□□ -1.13
CBX3-206ENST00000481057 CD69Q07108 199 aa8.02□□□□□ -1.13
CBX3-206ENST00000481057 GRAPQ13588 217 aa8.02□□□□□ -1.13
CBX3-206ENST00000481057 VGLL4Q14135 290 aa8.02□□□□□ -1.13
CBX3-206ENST00000481057 LMBR1LQ6UX01 489 aa8.02□□□□□ -1.13
CBX3-206ENST00000481057 GRAPLQ8TC17 118 aaPredicted RBP8.02□□□□□ -1.13
CBX3-206ENST00000481057 TRIM43Q96BQ3 446 aaPredicted RBP8.02□□□□□ -1.13
CBX3-206ENST00000481057 SLC28A3Q9HAS3 691 aa8.02□□□□□ -1.13
CBX3-206ENST00000481057 IFT122Q9HBG6 1241 aa8.02□□□□□ -1.13
CBX3-206ENST00000481057 TNKSO95271 1327 aa8.02□□□□□ -1.13
CBX3-206ENST00000481057 IBTKQ9P2D0 1353 aaPredicted RBP8.01□□□□□ -1.13
CBX3-206ENST00000481057 VPS13AQ96RL7 3174 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 A0A1W2PR48 441 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 RBP3P10745 1247 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 OSMP13725 252 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 ADCY7P51828 1080 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 KRT85P78386 507 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 GPSM2P81274 684 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 CDK17Q00537 523 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 SLFN13Q68D06 897 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 PGM2L1Q6PCE3 622 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 ANKRD23Q86SG2 305 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 SUGP1Q8IWZ8 645 aaKnown RBP8.01□□□□□ -1.13
CBX3-206ENST00000481057 FUBP3Q96I24 572 aaKnown RBP eCLIP8.01□□□□□ -1.13
CBX3-206ENST00000481057 FAXDC2Q96IV6 333 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 C20orf173Q96LM9 149 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 LMF1Q96S06 567 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 SLC6A15Q9H2J7 730 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 MKS1Q9NXB0 559 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 PPP4R1LQ9P1A2 415 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 PUF60Q9UHX1 559 aaKnown RBP8.01□□□□□ -1.13
CBX3-206ENST00000481057 OAZ3Q9UMX2 235 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 GPR45Q9Y5Y3 372 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 TECTAO75443 2155 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 GAKO14976 1311 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 UBN2Q6ZU65 1347 aa8.01□□□□□ -1.13
CBX3-206ENST00000481057 WDR87Q6ZQQ6 2873 aa8□□□□□ -1.13
CBX3-206ENST00000481057 NTSR2O95665 410 aa8□□□□□ -1.13
CBX3-206ENST00000481057 IL9P15248 144 aa8□□□□□ -1.13
CBX3-206ENST00000481057 AGXTP21549 392 aa8□□□□□ -1.13
CBX3-206ENST00000481057 GPTP24298 496 aa8□□□□□ -1.13
CBX3-206ENST00000481057 NBL1P41271 181 aa8□□□□□ -1.13
CBX3-206ENST00000481057 SLC5A3P53794 718 aa8□□□□□ -1.13
CBX3-206ENST00000481057 BPIFB4P59827 614 aa8□□□□□ -1.13
CBX3-206ENST00000481057 ADAM8P78325 824 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms