RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 SBK3P0C264 359 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 KRT4P19013 534 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 MALP21145 153 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 ZEB1P37275 1124 aaPredicted RBP5.26□□□□□ -1.57
COL9A1-206ENST00000470652 NOMO3P69849 1222 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 BLOC1S1P78537 153 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 HSD11B2P80365 405 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 KHDC1Q4VXA5 237 aaKnown RBP5.26□□□□□ -1.57
COL9A1-206ENST00000470652 NOMO2Q5JPE7 1267 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 UTP14CQ5TAP6 766 aaKnown RBP5.26□□□□□ -1.57
COL9A1-206ENST00000470652 ABHD17BQ5VST6 288 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 LCORLQ8N3X6 602 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 C3orf20Q8ND61 904 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 HOOK2Q96ED9 719 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 ADAM2Q99965 735 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 VRK1Q99986 396 aaPredicted RBP5.26□□□□□ -1.57
COL9A1-206ENST00000470652 ZSWIM1Q9BR11 485 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 TTPALQ9BTX7 342 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 PACSIN1Q9BY11 444 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 ALOXE3Q9BYJ1 711 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 WDR11Q9BZH6 1224 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 TMEM74BQ9NUR3 256 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 GNL3LQ9NVN8 582 aaKnown RBP5.26□□□□□ -1.57
COL9A1-206ENST00000470652 IP6K2Q9UHH9 426 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 PIK3C2BO00750 1634 aa5.26□□□□□ -1.57
COL9A1-206ENST00000470652 LMTK2Q8IWU2 1503 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 A0A087X1B8 175 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 MYADML2A6NDP7 307 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 UNC119BA6NIH7 251 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 RHOBTB3O94955 611 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 SPDEFO95238 335 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 GCP02774 474 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 CT47B1P0C2W7 299 aaPredicted RBP5.25□□□□□ -1.57
COL9A1-206ENST00000470652 FTH1P19P0C7X4 201 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 SMARCA1P28370 1054 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 SLC6A4P31645 630 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 CYP2C19P33261 490 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 AVPR1BP47901 424 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 FXR1P51114 621 aaKnown RBP eCLIP5.25□□□□□ -1.57
COL9A1-206ENST00000470652 USP14P54578 494 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 CXADRP78310 365 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 ZNF365Q70YC5 407 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 GALNT9Q9HCQ5 603 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 PACSIN3Q9UKS6 424 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 MTO1Q9Y2Z2 717 aaKnown RBP5.25□□□□□ -1.57
COL9A1-206ENST00000470652 MYO3AQ8NEV4 1616 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 AATKQ6ZMQ8 1374 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 PTPRMP28827 1452 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 ERVK-7P63135 1459 aa5.25□□□□□ -1.57
COL9A1-206ENST00000470652 COL4A3Q01955 1670 aa5.24□□□□□ -1.57
COL9A1-206ENST00000470652 ERN1O75460 977 aaKnown RBP5.24□□□□□ -1.57
COL9A1-206ENST00000470652 ABLIM3O94929 683 aa5.24□□□□□ -1.57
COL9A1-206ENST00000470652 AGFG2O95081 481 aa5.24□□□□□ -1.57
COL9A1-206ENST00000470652 ANXA1P04083 346 aa5.24□□□□□ -1.57
COL9A1-206ENST00000470652 EGR2P11161 476 aaPredicted RBP5.24□□□□□ -1.57
COL9A1-206ENST00000470652 EPHB1P54762 984 aa5.24□□□□□ -1.57
COL9A1-206ENST00000470652 NANOS3P60323 173 aaKnown RBP5.24□□□□□ -1.57
COL9A1-206ENST00000470652 MCL1Q07820 350 aa5.24□□□□□ -1.57
COL9A1-206ENST00000470652 SLFN5Q08AF3 891 aa5.24□□□□□ -1.57
COL9A1-206ENST00000470652 SNAPC2Q13487 334 aa5.24□□□□□ -1.57
COL9A1-206ENST00000470652 TP53BP2Q13625 1128 aa5.24□□□□□ -1.57
COL9A1-206ENST00000470652 PGS1Q32NB8 556 aa5.24□□□□□ -1.57
COL9A1-206ENST00000470652 SLC4A10Q6U841 1118 aa5.24□□□□□ -1.57
COL9A1-206ENST00000470652 FUBP1Q96AE4 644 aaKnown RBP5.24□□□□□ -1.57
COL9A1-206ENST00000470652 RNF31Q96EP0 1072 aa5.24□□□□□ -1.57
COL9A1-206ENST00000470652 USP25Q9UHP3 1055 aa5.24□□□□□ -1.57
COL9A1-206ENST00000470652 KIF1BO60333 1816 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 GRID2IPA4D2P6 1211 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 NT5C1B-RDH14C9J2C7 533 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 F2RL2O00254 374 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 PF4V1P10720 104 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 FCER1AP12319 257 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 HK3P52790 923 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 ZNF844Q08AG5 666 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 FSTL1Q12841 308 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 PIN1Q13526 163 aaPredicted RBP5.23□□□□□ -1.57
COL9A1-206ENST00000470652 CYP2A13Q16696 494 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 FLYWCH1Q4VC44 716 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 CCDC93Q567U6 631 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 CATIPQ7Z7H3 387 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 PDSS2Q86YH6 399 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 DNAJC10Q8IXB1 793 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 COLGALT2Q8IYK4 626 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 SUPT20HQ8NEM7 779 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 RGMAQ96B86 450 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 FAM167AQ96KS9 214 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 COQ10AQ96MF6 247 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 CAMKK2Q96RR4 588 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 GTPBP4Q9BZE4 634 aaKnown RBP5.23□□□□□ -1.57
COL9A1-206ENST00000470652 TOR3AQ9H497 397 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 WDCPQ9H6R7 721 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 KMT5AQ9NQR1 393 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 HSFX1Q9UBD0 423 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 PNMA8BQ9ULN7 279 aaPredicted RBP5.23□□□□□ -1.57
COL9A1-206ENST00000470652 NEU2Q9Y3R4 380 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 DMRT1Q9Y5R6 373 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 KANK1Q14678 1352 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 ANKRD30BQ9BXX2 1392 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 SPATA31D1Q6ZQQ2 1576 aa5.23□□□□□ -1.57
COL9A1-206ENST00000470652 UBR1Q8IWV7 1749 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms