RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 CFAP52Q8N1V2 620 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 LCORLQ8N3X6 602 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 SLC16A11Q8NCK7 471 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 PDPRQ8NCN5 879 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 PLBD2Q8NHP8 589 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 LRTOMTQ8WZ04 291 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 FUBP1Q96AE4 644 aaKnown RBP5.13□□□□□ -1.59
CLK1-208ENST00000464454 ADAM2Q99965 735 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 MLST8Q9BVC4 326 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 BHMT2Q9H2M3 363 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 SERHL2Q9H4I8 314 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 CHST12Q9NRB3 414 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.13□□□□□ -1.59
CLK1-208ENST00000464454 TBCCD1Q9NVR7 557 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 SLC45A2Q9UMX9 530 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 PCDHA1Q9Y5I3 950 aa5.13□□□□□ -1.59
CLK1-208ENST00000464454 PRAMEF33A0A0G2JMD5 474 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 A0A1W2PS29 197 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 PIPSLA2A3N6 862 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 CFAP69A5D8W1 941 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 UNC119BA6NIH7 251 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 E7ENX8 843 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 PMM2O15305 246 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 MGEA5O60502 916 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 PRAMEF10O60809 474 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 PQBP1O60828 265 aaKnown RBP5.12□□□□□ -1.59
CLK1-208ENST00000464454 SOAT2O75908 522 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 IFIT2P09913 472 aaKnown RBP5.12□□□□□ -1.59
CLK1-208ENST00000464454 VAV2P52735 878 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 ZNF135P52742 658 aaPredicted RBP5.12□□□□□ -1.59
CLK1-208ENST00000464454 TAP2Q03519 686 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 TP53BP2Q13625 1128 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 HABP2Q14520 560 aaPredicted RBP5.12□□□□□ -1.59
CLK1-208ENST00000464454 KHDC1LQ5JSQ8 128 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.12□□□□□ -1.59
CLK1-208ENST00000464454 SAMD3Q8N6K7 520 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 LARP4BQ92615 738 aaKnown RBP5.12□□□□□ -1.59
CLK1-208ENST00000464454 NUP62CLQ9H1M0 184 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 CYP4F11Q9HBI6 524 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 ANKFY1Q9P2R3 1169 aa5.12□□□□□ -1.59
CLK1-208ENST00000464454 TESQ9UGI8 421 aaKnown RBP5.12□□□□□ -1.59
CLK1-208ENST00000464454 TRGV11A0A075B6L2 103 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 A0A1W2PPL8 197 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 CCDC78A2IDD5 438 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 POLRMTO00411 1230 aaKnown RBP5.11□□□□□ -1.59
CLK1-208ENST00000464454 TOR1BO14657 336 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 PHGDHO43175 533 aaKnown RBP5.11□□□□□ -1.59
CLK1-208ENST00000464454 AHSGP02765 367 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 ITGAMP11215 1152 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 FDXRP22570 491 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 PEX2P28328 305 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 KCNJ5P48544 419 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 ANXA11P50995 505 aaKnown RBP5.11□□□□□ -1.59
CLK1-208ENST00000464454 NEK3P51956 506 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 SOX8P57073 446 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 RPS7P62081 194 aaKnown RBP5.11□□□□□ -1.59
CLK1-208ENST00000464454 FHL2Q14192 279 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 POLD3Q15054 466 aaPredicted RBP5.11□□□□□ -1.59
CLK1-208ENST00000464454 PREPLQ4J6C6 727 aaPredicted RBP5.11□□□□□ -1.59
CLK1-208ENST00000464454 SP5Q6BEB4 398 aaPredicted RBP5.11□□□□□ -1.59
CLK1-208ENST00000464454 TAPT1Q6NXT6 567 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 COQ10AQ96MF6 247 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 TRIB1Q96RU8 372 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 RPS6KC1Q96S38 1066 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 WDR11Q9BZH6 1224 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 TINAGL1Q9GZM7 467 aaPredicted RBP5.11□□□□□ -1.59
CLK1-208ENST00000464454 PCED1AQ9H1Q7 454 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 RSAD1Q9HA92 442 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 PIH1D1Q9NWS0 290 aaKnown RBP5.11□□□□□ -1.59
CLK1-208ENST00000464454 STAP2Q9UGK3 403 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 TPCN1Q9ULQ1 816 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 PCDHGB6Q9Y5F9 930 aa5.11□□□□□ -1.59
CLK1-208ENST00000464454 PRSS29PA6NIE9 313 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 E9PLN8 166 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 FRS3O43559 492 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 HKR1P10072 659 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 EGR2P11161 476 aaPredicted RBP5.1□□□□□ -1.59
CLK1-208ENST00000464454 TGM1P22735 817 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 ZEB1P37275 1124 aaPredicted RBP5.1□□□□□ -1.59
CLK1-208ENST00000464454 PHKA1P46020 1223 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 INHBCP55103 352 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 FPGSQ05932 587 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 EXOSC9Q06265 439 aaKnown RBP5.1□□□□□ -1.59
CLK1-208ENST00000464454 TCF15Q12870 199 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 HLXQ14774 488 aaPredicted RBP5.1□□□□□ -1.59
CLK1-208ENST00000464454 GEN1Q17RS7 908 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 ARID4BQ4LE39 1312 aaPredicted RBP5.1□□□□□ -1.59
CLK1-208ENST00000464454 SWSAP1Q6NVH7 229 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 Q8NA96 180 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 SUPT20HQ8NEM7 779 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 SNX19Q92543 992 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 PMM1Q92871 262 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 NACC2Q96BF6 587 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 APIPQ96GX9 242 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 NT5C1BQ96P26 610 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 MPHOSPH6Q99547 160 aaKnown RBP5.1□□□□□ -1.59
CLK1-208ENST00000464454 VKORC1Q9BQB6 163 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 NAA15Q9BXJ9 866 aaKnown RBP5.1□□□□□ -1.59
CLK1-208ENST00000464454 LRRC27Q9C0I9 530 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 SCAND2PQ9GZW5 306 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms