RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 CLSTN2Q9H4D0 955 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 POMKQ9H5K3 350 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 WDR6Q9NNW5 1121 aaKnown RBP12.99□□□□□ -0.33
HPS1-206ENST00000462743 CD320Q9NPF0 282 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 AVENQ9NQS1 362 aaPredicted RBP12.99□□□□□ -0.33
HPS1-206ENST00000462743 L1RE1Q9UN81 338 aa12.99□□□□□ -0.33
HPS1-206ENST00000462743 TACC1O75410 805 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 SEC24AO95486 1093 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 VNN2O95498 520 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 KRT13P13646 458 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 LHX1P48742 406 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 PMS1P54277 932 aaKnown RBP12.98□□□□□ -0.33
HPS1-206ENST00000462743 DLG4P78352 724 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 TRPC3Q13507 836 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 SOWAHAQ2M3V2 549 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 TDRD10Q5VZ19 366 aaKnown RBP12.98□□□□□ -0.33
HPS1-206ENST00000462743 ISM2Q6H9L7 571 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 TTI2Q6NXR4 508 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 FILIP1Q7Z7B0 1213 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 OR10T2Q8NGX3 314 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 FEZF2Q8TBJ5 459 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 C2orf15Q8WU43 125 aaKnown RBP12.98□□□□□ -0.33
HPS1-206ENST00000462743 SMG7Q92540 1137 aaKnown RBP12.98□□□□□ -0.33
HPS1-206ENST00000462743 TAF4BQ92750 862 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 SYAP1Q96A49 352 aaPredicted RBP12.98□□□□□ -0.33
HPS1-206ENST00000462743 CEP63Q96MT8 703 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 APOL5Q9BWW9 433 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 NR2E1Q9Y466 385 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 SNX9Q9Y5X1 595 aa12.98□□□□□ -0.33
HPS1-206ENST00000462743 DENND4AQ7Z401 1863 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 A0A0C4DFX4 3053 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 TSC2P49815 1807 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 SPDYE4A6NLX3 237 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 GOLGA6L22H0YM25 854 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 TNFRSF10AO00220 468 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 SLC16A3O15427 465 aaKnown RBP12.97□□□□□ -0.33
HPS1-206ENST00000462743 XYLBO75191 536 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 VNN1O95497 513 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 WARSP23381 471 aaKnown RBP12.97□□□□□ -0.33
HPS1-206ENST00000462743 ARPP19P56211 112 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 MYL6P60660 151 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 ADCY1Q08828 1119 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 CAMK4Q16566 473 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 SGSM1Q2NKQ1 1148 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 RNF19BQ6ZMZ0 732 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 LRRTM3Q86VH5 581 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 DCP1BQ8IZD4 617 aaKnown RBP12.97□□□□□ -0.33
HPS1-206ENST00000462743 ZDHHC14Q8IZN3 488 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 PLCD3Q8N3E9 789 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 SLC7A14Q8TBB6 771 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 FAXDC2Q96IV6 333 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 DUSP9Q99956 384 aaKnown RBP12.97□□□□□ -0.33
HPS1-206ENST00000462743 CYP4F11Q9HBI6 524 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 CDH22Q9UJ99 828 aa12.97□□□□□ -0.33
HPS1-206ENST00000462743 BICDL2A1A5D9 508 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 MTMR11A4FU01 709 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 BIN1O00499 593 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 PMM2O15305 246 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 STX10O60499 249 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 PHACTR2O75167 634 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 WEE2P0C1S8 567 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 EPB41P11171 864 aaKnown RBP12.96□□□□□ -0.33
HPS1-206ENST00000462743 CPB1P15086 417 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 PCSK1P29120 753 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 TUFMP49411 452 aaKnown RBP12.96□□□□□ -0.33
HPS1-206ENST00000462743 MYL7Q01449 175 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 PPP3CAQ08209 521 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 NCOA4Q13772 614 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 NFE2Q16621 373 aaPredicted RBP12.96□□□□□ -0.33
HPS1-206ENST00000462743 WDR72Q3MJ13 1102 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 FAM171BQ6P995 826 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 OTOP3Q7RTS5 596 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 FRMD5Q7Z6J6 570 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 OSTM1Q86WC4 334 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 MLKLQ8NB16 471 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 SPPL2BQ8TCT7 592 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 KBTBD7Q8WVZ9 684 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 TMEM209Q96SK2 561 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 PKMYT1Q99640 499 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 PIDD1Q9HB75 910 aa12.96□□□□□ -0.33
HPS1-206ENST00000462743 METTL14Q9HCE5 456 aaKnown RBP12.96□□□□□ -0.33
HPS1-206ENST00000462743 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.96□□□□□ -0.33
HPS1-206ENST00000462743 UNC80Q8N2C7 3258 aa12.95□□□□□ -0.34
HPS1-206ENST00000462743 TRIM49BA6NDI0 452 aa12.95□□□□□ -0.34
HPS1-206ENST00000462743 PI4K2BG5E9Z4 385 aa12.95□□□□□ -0.34
HPS1-206ENST00000462743 TULP1O00294 542 aaPredicted RBP12.95□□□□□ -0.34
HPS1-206ENST00000462743 PRRG1O14668 218 aa12.95□□□□□ -0.34
HPS1-206ENST00000462743 MICAL2O94851 1124 aa12.95□□□□□ -0.34
HPS1-206ENST00000462743 ASS1P00966 412 aaKnown RBP12.95□□□□□ -0.34
HPS1-206ENST00000462743 PTPN2P17706 415 aa12.95□□□□□ -0.34
HPS1-206ENST00000462743 EPHA5P54756 1037 aa12.95□□□□□ -0.34
HPS1-206ENST00000462743 MARSP56192 900 aaKnown RBP12.95□□□□□ -0.34
HPS1-206ENST00000462743 DUSP4Q13115 394 aa12.95□□□□□ -0.34
HPS1-206ENST00000462743 BIRC3Q13489 604 aa12.95□□□□□ -0.34
HPS1-206ENST00000462743 CT47A1Q5JQC4 288 aaPredicted RBP12.95□□□□□ -0.34
HPS1-206ENST00000462743 KRT39Q6A163 491 aa12.95□□□□□ -0.34
HPS1-206ENST00000462743 RBM43Q6ZSC3 357 aaKnown RBP12.95□□□□□ -0.34
HPS1-206ENST00000462743 ADGRF2Q8IZF7 708 aa12.95□□□□□ -0.34
HPS1-206ENST00000462743 ATAD1Q8NBU5 361 aa12.95□□□□□ -0.34
HPS1-206ENST00000462743 GPT2Q8TD30 523 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms