RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 SNX17Q15036 470 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 LRRC23Q53EV4 343 aaPredicted RBP11.04□□□□□ -0.64
HERC4-207ENST00000460168 GDF6Q6KF10 455 aaPredicted RBP11.04□□□□□ -0.64
HERC4-207ENST00000460168 OLFML1Q6UWY5 402 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 TRAPPC11Q7Z392 1133 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 TMEM40Q8WWA1 233 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 SHC3Q92529 594 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 OSBPL9Q96SU4 736 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 SLC7A5P2Q9GIP4 190 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 SEPT11Q9NVA2 429 aaKnown RBP11.04□□□□□ -0.64
HERC4-207ENST00000460168 SAGE1Q9NXZ1 904 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 ZNF510Q9Y2H8 683 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 DUSP10Q9Y6W6 482 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 CEP350Q5VT06 3117 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 THSD7BQ9C0I4 1608 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 FANCGO15287 622 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 INHAP05111 366 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 KRT5P13647 590 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 CST5P28325 142 aaPredicted RBP11.04□□□□□ -0.64
HERC4-207ENST00000460168 OAS2P29728 719 aaKnown RBP11.04□□□□□ -0.64
HERC4-207ENST00000460168 TRPC3Q13507 836 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 DCAF4L1Q3SXM0 396 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 C4orf46Q504U0 113 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 SPOPLQ6IQ16 392 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 ALKBH5Q6P6C2 394 aaKnown RBP11.04□□□□□ -0.64
HERC4-207ENST00000460168 SLC27A1Q6PCB7 646 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 RSPH3Q86UC2 560 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 GLYCTKQ8IVS8 523 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 SLAIN1Q8ND83 568 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 KLHDC9Q8NEP7 349 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 DTNBP1Q96EV8 351 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 RBM41Q96IZ5 413 aaKnown RBP11.04□□□□□ -0.64
HERC4-207ENST00000460168 ACAP3Q96P50 834 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 CORO1BQ9BR76 489 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 SLC39A3Q9BRY0 314 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 BEGAINQ9BUH8 593 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 NAGPAQ9UK23 515 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 ADAM21Q9UKJ8 722 aa11.04□□□□□ -0.64
HERC4-207ENST00000460168 PIN4Q9Y237 131 aaKnown RBP11.04□□□□□ -0.64
HERC4-207ENST00000460168 TMEM221A6NGB7 291 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 TMEM110-MUSTN1A8MSY1 372 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 CYP26A1O43174 497 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 NPTXRO95502 500 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 HOXA11P31270 313 aaPredicted RBP11.03□□□□□ -0.64
HERC4-207ENST00000460168 CRYBB1P53674 252 aaPredicted RBP11.03□□□□□ -0.64
HERC4-207ENST00000460168 ROR2Q01974 943 aaKnown RBP11.03□□□□□ -0.64
HERC4-207ENST00000460168 C10orf76Q5T2E6 689 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 FAM71AQ8IYT1 594 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 SLC35F6Q8N357 371 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 GABPB2Q8TAK5 448 aaPredicted RBP11.03□□□□□ -0.64
HERC4-207ENST00000460168 SPOCK2Q92563 424 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 HMX1Q9NP08 348 aaPredicted RBP11.03□□□□□ -0.64
HERC4-207ENST00000460168 TSKSQ9UJT2 592 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 ANK1P16157 1881 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 GOLGA6L10A6NI86 522 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 LACTBL1A8MY62 500 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 URI1O94763 535 aaPredicted RBP11.03□□□□□ -0.64
HERC4-207ENST00000460168 CST3P01034 146 aaPredicted RBP11.03□□□□□ -0.64
HERC4-207ENST00000460168 NFICP08651 508 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 KRT19P08727 400 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 TNFAIP3P21580 790 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 AXLP30530 894 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 GRK4P32298 578 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 PDE6CP51160 858 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 ELF2Q15723 593 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 NAB2Q15742 525 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 JADE1Q6IE81 842 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 CCSAPQ6IQ19 270 aaPredicted RBP11.03□□□□□ -0.64
HERC4-207ENST00000460168 TLDC1Q6P9B6 456 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 LRRC49Q8IUZ0 686 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 U2AF1L4Q8WU68 220 aaKnown RBP11.03□□□□□ -0.64
HERC4-207ENST00000460168 DHX38Q92620 1227 aaKnown RBP11.03□□□□□ -0.64
HERC4-207ENST00000460168 PARD6BQ9BYG5 372 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 CELF4Q9BZC1 486 aaKnown RBP11.03□□□□□ -0.64
HERC4-207ENST00000460168 ASB7Q9H672 318 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 TRIM17Q9Y577 477 aa11.03□□□□□ -0.64
HERC4-207ENST00000460168 MROH7Q68CQ1 1323 aa11.02□□□□□ -0.64
HERC4-207ENST00000460168 CTAGE9A4FU28 777 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 DDX3XO00571 662 aaKnown RBP eCLIP11.02□□□□□ -0.65
HERC4-207ENST00000460168 PJA2O43164 708 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 ASS1P00966 412 aaKnown RBP11.02□□□□□ -0.65
HERC4-207ENST00000460168 CTSHP09668 335 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 TBXAS1P24557 533 aaPredicted RBP11.02□□□□□ -0.65
HERC4-207ENST00000460168 GRM5P41594 1212 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 CLCN6P51797 869 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 PRMT2P55345 433 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 MRPS6P82932 125 aaKnown RBP11.02□□□□□ -0.65
HERC4-207ENST00000460168 CUL2Q13617 745 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 SGSM1Q2NKQ1 1148 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 SLC10A6Q3KNW5 377 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.02□□□□□ -0.65
HERC4-207ENST00000460168 SLC30A9Q6PML9 568 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 SLC47A2Q86VL8 602 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 SPATS2Q86XZ4 545 aaKnown RBP11.02□□□□□ -0.65
HERC4-207ENST00000460168 EPS8L1Q8TE68 723 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 ZFAND2BQ8WV99 257 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 ALS2CR12Q96Q35 445 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 SH3GL1Q99961 368 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 PACSIN1Q9BY11 444 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 APOBEC3GQ9HC16 384 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms