RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 GRK6P43250 576 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 KCNC1P48547 511 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 SLC11A2P49281 568 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 MAPK10P53779 464 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 TRIM14Q14142 442 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 PDCD2Q16342 344 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 SLC44A4Q53GD3 710 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 FKBP15Q5T1M5 1219 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 UTP14CQ5TAP6 766 aaKnown RBP4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 LMBRD2Q68DH5 695 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 BEND5Q7L4P6 421 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 PRRT2Q7Z6L0 340 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 USP37Q86T82 979 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 GGNQ86UU5 652 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 FAM83AQ86UY5 434 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 XYLT1Q86Y38 959 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 SYTL1Q8IYJ3 562 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 SDR16C5Q8N3Y7 309 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 AOPEPQ8N6M6 819 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 VGLL2Q8N8G2 317 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 OR52N2Q8NGI0 321 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 OR56A3Q8NH54 315 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 IQCDQ96DY2 449 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 TEPSINQ96N21 525 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 KLHL32Q96NJ5 620 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 LMF1Q96S06 567 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 PLA2G12BQ9BX93 195 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 TINAGL1Q9GZM7 467 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 MEGF9Q9H1U4 602 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 CHST8Q9H2A9 424 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 C12orf65Q9H3J6 166 aaKnown RBP4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 AGAP1Q9UPQ3 857 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 CLCA2Q9UQC9 943 aa4.51□□□□□ -1.69
HMGB1P15-201ENST00000453854 ZNF785A8K8V0 405 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 E9PLN8 166 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 HNRNPDLO14979 420 aaKnown RBP4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 FFAR2O15552 330 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 THAP12O43422 761 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 TLR5O60602 858 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 CDC14BO60729 498 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 TXNP10599 105 aaKnown RBP4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 PIM1P11309 404 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 KLRC1P26715 233 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 CHKAP35790 457 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 PTTG1IPP53801 180 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 UCP3P55916 312 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 RAP2BP61225 183 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 MXRA7P84157 204 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 ICA1Q05084 483 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 PUM3Q15397 648 aaKnown RBP4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 SURF1Q15526 300 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 CRB2Q5IJ48 1285 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 ATXN7L2Q5T6C5 722 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 PGBD2Q6P3X8 592 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 CCDC174Q6PII3 467 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 ARHGEF18Q6ZSZ5 1173 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 UNC13DQ70J99 1090 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 ZFPM1Q8IX07 1006 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 SMAP1Q8IYB5 467 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 FITM2Q8N6M3 262 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 DNAJC5GQ8N7S2 189 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 FANCBQ8NB91 859 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 TMIEQ8NEW7 156 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 MDGA1Q8NFP4 955 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 ZNF384Q8TF68 577 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 TFAP2CQ92754 450 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 MPHOSPH9Q99550 1183 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 VKORC1Q9BQB6 163 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 ISCA1Q9BUE6 129 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 SPATA5L1Q9BVQ7 753 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 EIF2AQ9BY44 585 aaKnown RBP4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 CPEB1Q9BZB8 566 aaKnown RBP4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 EPC1Q9H2F5 836 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 GJB4Q9NTQ9 266 aa4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 MAP3K20Q9NYL2 800 aaKnown RBP4.5□□□□□ -1.69
HMGB1P15-201ENST00000453854 hCG_1642624A0A1W2PR95 340 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 CDHR4A6H8M9 788 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 GOLGA6L3A6NEY3 463 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 DRGXA6NNA5 263 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 PRR5-ARHGAP8B1AHC4 643 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 AGFG2O95081 481 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 A1BGP04217 495 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 GRPP07492 148 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 SLC6A2P23975 617 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 PDIA3P30101 505 aaKnown RBP4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 ALDH9A1P49189 494 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 ZNF135P52742 658 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 WNT3P56703 355 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 PSMC1P62191 440 aaKnown RBP4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 SLFN5Q08AF3 891 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 LMOD3Q0VAK6 560 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 GALNT1Q10472 559 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 GRM7Q14831 915 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 NT5DC1Q5TFE4 455 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 METRNLQ641Q3 311 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 SLFN13Q68D06 897 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 ZNF280DQ6N043 979 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 EFCAB12Q6NXP0 572 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 RNF44Q7L0R7 432 aa4.49□□□□□ -1.69
HMGB1P15-201ENST00000453854 CPXCR1Q8N123 301 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms