RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 NXF1Q9UBU9 619 aaKnown RBP12.84□□□□□ -0.35
HDAC8-214ENST00000439122 PPME1Q9Y570 386 aa12.84□□□□□ -0.35
HDAC8-214ENST00000439122 GOLGA6L7A0A1B0GV03 622 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 B4GALT5O43286 388 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 GAS2O43903 313 aaKnown RBP12.83□□□□□ -0.36
HDAC8-214ENST00000439122 TJP3O95049 919 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 HOXC6P09630 235 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 ZNF252P-AS1Q0IIN9 211 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 PLCB4Q15147 1175 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 SURF1Q15526 300 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 WDR78Q5VTH9 848 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 FBXW10Q5XX13 1052 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 MFSD7Q6UXD7 560 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 ERICH1Q86X53 443 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 FBXO16Q8IX29 292 aaPredicted RBP12.83□□□□□ -0.36
HDAC8-214ENST00000439122 TFAP2BQ92481 460 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 ARHGEF2Q92974 986 aaKnown RBP12.83□□□□□ -0.36
HDAC8-214ENST00000439122 DCPSQ96C86 337 aaKnown RBP12.83□□□□□ -0.36
HDAC8-214ENST00000439122 ACSF2Q96CM8 615 aaPredicted RBP12.83□□□□□ -0.36
HDAC8-214ENST00000439122 ZBTB10Q96DT7 871 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 ZNF317Q96PQ6 595 aaPredicted RBP12.83□□□□□ -0.36
HDAC8-214ENST00000439122 C2orf40Q9H1Z8 148 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 CTNNAL1Q9UBT7 734 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 CEP83Q9Y592 693 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 A0A0G2JLL6 359 aaPredicted RBP12.83□□□□□ -0.36
HDAC8-214ENST00000439122 ABLIM1O14639 778 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 DDNO94850 711 aaPredicted RBP12.83□□□□□ -0.36
HDAC8-214ENST00000439122 TNNC2P02585 160 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 KRT19P08727 400 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 ASPAP45381 313 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 LACTBP83111 547 aaPredicted RBP12.83□□□□□ -0.36
HDAC8-214ENST00000439122 OGDHQ02218 1023 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 SF3A3Q12874 501 aaKnown RBP eCLIP12.83□□□□□ -0.36
HDAC8-214ENST00000439122 P3H1Q32P28 736 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 ATF7IP2Q5U623 682 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 MPZL3Q6UWV2 235 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 TSHZ1Q6ZSZ6 1077 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 PRRT2Q7Z6L0 340 aaPredicted RBP12.83□□□□□ -0.36
HDAC8-214ENST00000439122 DHX37Q8IY37 1157 aaKnown RBP12.83□□□□□ -0.36
HDAC8-214ENST00000439122 EXOC8Q8IYI6 725 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 WDTC1Q8N5D0 677 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 CEP120Q8N960 986 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 DYDC1Q8WWB3 177 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 ANKRD36BP1Q96IX9 119 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 TXNRD2Q9NNW7 524 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 NINJ2Q9NZG7 142 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 DNPEPQ9ULA0 475 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 ZNF148Q9UQR1 794 aa12.83□□□□□ -0.36
HDAC8-214ENST00000439122 A0A0G2JMZ2 1700 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 IGKV6-21A0A0C4DH24 114 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 SOCS7O14512 581 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 LIASO43766 372 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 LGR5O75473 907 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 CNMDO75829 334 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 FSBPO95073 299 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 VIMP08670 466 aaKnown RBP12.82□□□□□ -0.36
HDAC8-214ENST00000439122 CD19P15391 556 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 EIF4BP23588 611 aaKnown RBP12.82□□□□□ -0.36
HDAC8-214ENST00000439122 KLRC2P26717 231 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 ATP5DP30049 168 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 IREB2P48200 963 aaKnown RBP12.82□□□□□ -0.36
HDAC8-214ENST00000439122 LMNB2Q03252 620 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 TXNRD3NBQ6F5E7 133 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 KCNV1Q6PIU1 500 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 PLPPR4Q7Z2D5 763 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 MGARPQ8TDB4 240 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 COPS5Q92905 334 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 HAUS1Q96CS2 278 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 CLMNQ96JQ2 1002 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 C9orf72Q96LT7 481 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 SGIP1Q9BQI5 828 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 ZNF518BQ9C0D4 1074 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 XYLT2Q9H1B5 865 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 TCRBV5S1A1TA0A578 114 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 LRRD1A4D1F6 860 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 FOXO6A8MYZ6 492 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 ACKR2O00590 384 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 SLC25A27O95847 323 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 CREB1P16220 341 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 CLCN3P51790 818 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 TFDP1Q14186 410 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 PIGHQ14442 188 aaPredicted RBP12.82□□□□□ -0.36
HDAC8-214ENST00000439122 KCTD2Q14681 263 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 LRRC14Q15048 493 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 CNGA2Q16280 664 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 Q3C1V9 767 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 EFCAB12Q6NXP0 572 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 TAX1BP1Q86VP1 789 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 LRRC34Q8IZ02 419 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 FGD4Q96M96 766 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 JPH2Q9BR39 696 aaPredicted RBP12.82□□□□□ -0.36
HDAC8-214ENST00000439122 OSBPL7Q9BZF2 842 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 FHDC1Q9C0D6 1143 aaPredicted RBP12.82□□□□□ -0.36
HDAC8-214ENST00000439122 TBK1Q9UHD2 729 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 POLIQ9UNA4 740 aa12.82□□□□□ -0.36
HDAC8-214ENST00000439122 TMEM120BA0PK00 339 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 GOLGA8SH3BPF8 625 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 ZSCAN5DPP0CG00 497 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 CXCL8P10145 99 aa12.81□□□□□ -0.36
HDAC8-214ENST00000439122 PROZP22891 400 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms