RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 FMO1Q01740 532 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 KLF1Q13351 362 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 MED21Q13503 144 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 WASHC2DQ5SRD0 308 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 ACAD10Q6JQN1 1059 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 C4orf22Q6V702 233 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 ZPBP2Q6X784 338 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 CYS1Q717R9 158 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 EXOC3L1Q86VI1 746 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 EXOC8Q8IYI6 725 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 RNF217Q8TC41 542 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 MAGEB18Q96M61 343 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 TMEM117Q9H0C3 514 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 STK32BQ9NY57 414 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 NR2E1Q9Y466 385 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 FRMPD2Q68DX3 1309 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-205ENST00000397611 IGSF9BQ9UPX0 1349 aa5.74□□□□□ -1.49
PTPRD-205ENST00000397611 C2CD2LO14523 706 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 CYP1A1P04798 512 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 ICAM1P05362 532 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 NMT1P30419 496 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 MAPK4P31152 587 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 DYNLT1P63172 113 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 MORF4L2Q15014 288 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 ASRGL1Q7L266 308 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 TRABD2AQ86V40 505 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 MFN1Q8IWA4 741 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 ZCCHC9Q8N567 271 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 HIC2Q96JB3 615 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 GIPC1O14908 333 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 KRT1P04264 644 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 RARAP10276 462 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 ITGB5P18084 799 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 MARK3P27448 753 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 NCALDP61601 193 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 YWHAEP62258 255 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 TMPRSS15P98073 1019 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 SP4Q02446 784 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 PPP3CAQ08209 521 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 GRM1Q13255 1194 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 FAM98CQ17RN3 349 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 BBS9Q3SYG4 887 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 CBWD6Q4V339 395 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 CBWD3Q5JTY5 395 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 CBWD5Q5RIA9 395 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 TPH2Q8IWU9 490 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 DENND1AQ8TEH3 1009 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 USP6NLQ92738 828 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 CCDC124Q96CT7 223 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 LRRC39Q96DD0 335 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 P2RX7Q99572 595 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 CELF4Q9BZC1 486 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 PFDN4Q9NQP4 134 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 DNAJB4Q9UDY4 337 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 ECM29Q5VYK3 1845 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 GAS2O43903 313 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 TOMM70O94826 608 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 TRIM49P0CI25 452 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 TRIM49CP0CI26 452 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 TNFAIP1Q13829 316 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 BBS12Q6ZW61 710 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 SV2AQ7L0J3 742 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 AFAP1L2Q8N4X5 818 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 HAUS8Q9BT25 410 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 HEMGNQ9BXL5 484 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 PCDH9Q9HC56 1237 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 HSPBP1Q9NZL4 362 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 ARHGAP28Q9P2N2 729 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 FAM198AQ9UFP1 575 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 TRPC5Q9UL62 973 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 DDX60LQ5H9U9 1706 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 ATP9AO75110 1047 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 PDE5AO76074 875 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 ENO1P06733 434 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 RPL21P46778 160 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 PDK4Q16654 411 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 ZNF577Q9BSK1 485 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 ZCWPW1Q9H0M4 648 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 ACSS3Q9H6R3 686 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 STRIP2Q9ULQ0 834 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 NEU2Q9Y3R4 380 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 C2CD2Q9Y426 696 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 A0A1B0GUL6 1792 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 CASZ1Q86V15 1759 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 BAZ2AQ9UIF9 1905 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 UMODL1Q5DID0 1318 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 TMEM120BA0PK00 339 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 NOP56O00567 594 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 ADCY3O60266 1144 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 UNGP13051 313 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 CCNB1P14635 433 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 SAT1P21673 171 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 CACNA2D1P54289 1103 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 IL1RL1Q01638 556 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 KDSRQ06136 332 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 THOC5Q13769 683 aaKnown RBP5.73□□□□□ -1.49
PTPRD-205ENST00000397611 ZNF354CQ86Y25 554 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 TMEM161BQ8NDZ6 487 aa5.73□□□□□ -1.49
PTPRD-205ENST00000397611 GLG1Q92896 1179 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms