RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 ZBTB8OSQ8IWT0 167 aa11.13□□□□□ -0.63
ACTN1-203ENST00000394419 AGBL3Q8NEM8 1001 aa11.13□□□□□ -0.63
ACTN1-203ENST00000394419 PRPF31Q8WWY3 499 aaKnown RBP11.13□□□□□ -0.63
ACTN1-203ENST00000394419 P3H4Q92791 437 aa11.13□□□□□ -0.63
ACTN1-203ENST00000394419 GPRASP2Q96D09 838 aa11.13□□□□□ -0.63
ACTN1-203ENST00000394419 ZBTB10Q96DT7 871 aa11.13□□□□□ -0.63
ACTN1-203ENST00000394419 C12orf65Q9H3J6 166 aaKnown RBP11.13□□□□□ -0.63
ACTN1-203ENST00000394419 AGAP1Q9UPQ3 857 aa11.13□□□□□ -0.63
ACTN1-203ENST00000394419 SCN9AQ15858 1988 aa11.13□□□□□ -0.63
ACTN1-203ENST00000394419 A8MUI8 341 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 LYPLA2O95372 231 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 ATP6V1G2O95670 118 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 LDHAP00338 332 aaKnown RBP11.12□□□□□ -0.63
ACTN1-203ENST00000394419 TNNC2P02585 160 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 GJB1P08034 283 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 GLRA2P23416 452 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 TBXAS1P24557 533 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-203ENST00000394419 TARSP26639 723 aaKnown RBP11.12□□□□□ -0.63
ACTN1-203ENST00000394419 NOMO3P69849 1222 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 HADHQ16836 314 aaKnown RBP11.12□□□□□ -0.63
ACTN1-203ENST00000394419 TXNRD3NBQ6F5E7 133 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 DEFB132Q7Z7B7 95 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 GGA2Q9UJY4 613 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 DIAPH2O60879 1101 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 RNF8O76064 485 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 OATP04181 439 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 SUPT20HL2P0C7V6 817 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 CETPP11597 493 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 KRT3P12035 628 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 KRT4P19013 534 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 RXRBP28702 533 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 HIRAP54198 1017 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-203ENST00000394419 ITIH4Q14624 930 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 TMEM132BQ14DG7 1078 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 SUPT20HL1Q3ZLR7 823 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 SPDYCQ5MJ68 293 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 BSPRYQ5W0U4 402 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 SCARA3Q6AZY7 606 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 CCDC33Q8N5R6 958 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 ZNF526Q8TF50 670 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-203ENST00000394419 LRRN4Q8WUT4 740 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 TRAPPC12Q8WVT3 735 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 TMEM237Q96Q45 408 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 LRRC37BQ96QE4 947 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 C17orf75Q9HAS0 396 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 NPHS2Q9NP85 383 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 CISHQ9NSE2 258 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 COQ4Q9Y3A0 265 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 HEY1Q9Y5J3 304 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 C5orf60A6NFR6 353 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 SRRM3A6NNA2 597 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-203ENST00000394419 MSH2P43246 934 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 ALDH5A1P51649 535 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-203ENST00000394419 COPS2P61201 443 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 CENPCQ03188 943 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 FSTL1Q12841 308 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 PSMD6Q15008 389 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 MAPK6Q16659 721 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 HIF1AQ16665 826 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 CYP1B1Q16678 543 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 DUOXA2Q1HG44 320 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 ZNF568Q3ZCX4 644 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 VSTM1Q6UX27 236 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 C3orf62Q6ZUJ4 267 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 RCOR2Q8IZ40 523 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 SAMD3Q8N6K7 520 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 TTC17Q96AE7 1141 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 CXorf56Q9H5V9 222 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.12□□□□□ -0.631e-6■■■■■ 30.4
ACTN1-203ENST00000394419 PIM2Q9P1W9 311 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 HAO1Q9UJM8 370 aa11.12□□□□□ -0.63
ACTN1-203ENST00000394419 TBC1D12O60347 775 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 GRIN3BO60391 1043 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 PLA2G6O60733 806 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 NQO1P15559 274 aaKnown RBP11.11□□□□□ -0.63
ACTN1-203ENST00000394419 CCDC6Q16204 474 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 FYB2Q5VWT5 728 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 DARS2Q6PI48 645 aaKnown RBP11.11□□□□□ -0.63
ACTN1-203ENST00000394419 TRIM72Q6ZMU5 477 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 SYDE1Q6ZW31 735 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-203ENST00000394419 ZNF677Q86XU0 584 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 RMDN2Q96LZ7 410 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 CHMP2BQ9UQN3 213 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 ZNF541Q9H0D2 1346 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 MAPK13O15264 365 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 PSTPIP1O43586 416 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 MTA2O94776 668 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 CALB1P05937 261 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 KCNA2P16389 499 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 POLR2BP30876 1174 aaKnown RBP11.11□□□□□ -0.63
ACTN1-203ENST00000394419 GCLCP48506 637 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-203ENST00000394419 NRLP54845 237 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 IRX4P78413 519 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 FAXCQ5TGI0 409 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 C1orf228Q6PIY5 440 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 DLK2Q6UY11 383 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 CEP120Q8N960 986 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 FAM71DQ8N9W8 422 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 EXD1Q8NHP7 514 aa11.11□□□□□ -0.63
ACTN1-203ENST00000394419 ACTL9Q8TC94 416 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms