RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 TDRPQ86YL5 185 aa13.39□□□□□ -0.27
PUDP-201ENST00000381077 IFNLR1Q8IU57 520 aaPredicted RBP13.39□□□□□ -0.27
PUDP-201ENST00000381077 CFAP57Q96MR6 1250 aa13.39□□□□□ -0.27
PUDP-201ENST00000381077 TCHPQ9BT92 498 aa13.39□□□□□ -0.27
PUDP-201ENST00000381077 SMARCAD1Q9H4L7 1026 aa13.39□□□□□ -0.27
PUDP-201ENST00000381077 SAMD15Q9P1V8 674 aa13.39□□□□□ -0.27
PUDP-201ENST00000381077 TNFSF13BQ9Y275 285 aa13.39□□□□□ -0.27
PUDP-201ENST00000381077 DNAJC25-GNG10A0A024R161 153 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 DNALI1O14645 258 aaPredicted RBP13.38□□□□□ -0.27
PUDP-201ENST00000381077 CST3P01034 146 aaPredicted RBP13.38□□□□□ -0.27
PUDP-201ENST00000381077 KRT7P08729 469 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 ATICP31939 592 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 HIRAP54198 1017 aaPredicted RBP13.38□□□□□ -0.27
PUDP-201ENST00000381077 TNFAIP2Q03169 654 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 ZNF699Q32M78 642 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 PRAMEF18Q5VWM3 479 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 IZUMO3Q5VZ72 239 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 DCUN1D2Q6PH85 259 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 ERICH1Q86X53 443 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 NCAPG2Q86XI2 1143 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 ERO1BQ86YB8 467 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 PASD1Q8IV76 773 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 ATG4AQ8WYN0 398 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 ARHGEF2Q92974 986 aaKnown RBP13.38□□□□□ -0.27
PUDP-201ENST00000381077 HERPUD2Q9BSE4 406 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 MTMR12Q9C0I1 747 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 TMEM51Q9NW97 253 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 SENP1Q9P0U3 644 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 FETUBQ9UGM5 382 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 R3HDM2Q9Y2K5 976 aaKnown RBP13.38□□□□□ -0.27
PUDP-201ENST00000381077 OTOFQ9HC10 1997 aa13.38□□□□□ -0.27
PUDP-201ENST00000381077 NOP56O00567 594 aaKnown RBP13.37□□□□□ -0.27
PUDP-201ENST00000381077 CHKAP35790 457 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 FSTL1Q12841 308 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 QPCTQ16769 361 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 ALLCQ8N6M5 410 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 RNF149Q8NC42 400 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 GTF3C2Q8WUA4 911 aaPredicted RBP13.37□□□□□ -0.27
PUDP-201ENST00000381077 BCO2Q9BYV7 579 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 XYLT2Q9H1B5 865 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 CYP3A43Q9HB55 503 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 PCDH9Q9HC56 1237 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 LRRC4CQ9HCJ2 640 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 PRMT7Q9NVM4 692 aaPredicted RBP13.37□□□□□ -0.27
PUDP-201ENST00000381077 NINJ2Q9NZG7 142 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 AGTPBP1Q9UPW5 1226 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 KCNH4Q9UQ05 1017 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 SHOC2Q9UQ13 582 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 CAPN7Q9Y6W3 813 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 ZSWIM8A7E2V4 1837 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 hCG_1818297A0A087WSY0 165 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 SIGLEC16A6NMB1 481 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 ZBTB42B2RXF5 422 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 ANKRD65E5RJM6 399 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 H0YHG0 523 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 KRT1P04264 644 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 CFHP08603 1231 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 MYL6P60660 151 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 HADHQ16836 314 aaKnown RBP13.37□□□□□ -0.27
PUDP-201ENST00000381077 RNF187Q5TA31 235 aaPredicted RBP13.37□□□□□ -0.27
PUDP-201ENST00000381077 ATF7IP2Q5U623 682 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 PPP1R21Q6ZMI0 780 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 SPOCD1Q6ZMY3 1216 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 MDM1Q8TC05 714 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 MIS12Q9H081 205 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 MROH8Q9H579 483 aa13.37□□□□□ -0.27
PUDP-201ENST00000381077 ADARB2Q9NS39 739 aaKnown RBP13.37□□□□□ -0.27
PUDP-201ENST00000381077 FAM170AA1A519 330 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 ACSL3O95573 720 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 STAU1O95793 577 aaKnown RBP13.36□□□□□ -0.27
PUDP-201ENST00000381077 CALCAP01258 141 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 TNFSF9P41273 254 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 ASPAP45381 313 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 VCPP55072 806 aaKnown RBP13.36□□□□□ -0.27
PUDP-201ENST00000381077 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
PUDP-201ENST00000381077 OASLQ15646 514 aaKnown RBP13.36□□□□□ -0.27
PUDP-201ENST00000381077 TAZQ16635 292 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 ANKRD20A8PQ5CZ79 823 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 GPAT2Q6NUI2 795 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 CCDC62Q6P9F0 684 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 ARHGEF18Q6ZSZ5 1173 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 GSTA5Q7RTV2 222 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 NT5DC4Q86YG4 428 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 THNSL1Q8IYQ7 743 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 GBP7Q8N8V2 638 aaPredicted RBP13.36□□□□□ -0.27
PUDP-201ENST00000381077 SHCBP1Q8NEM2 672 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 CCT6BQ92526 530 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 ELMO3Q96BJ8 720 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 SGSM3Q96HU1 749 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 ASB7Q9H672 318 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 EURLQ9NYK6 297 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 TPX2Q9ULW0 747 aaKnown RBP13.36□□□□□ -0.27
PUDP-201ENST00000381077 ANK1P16157 1881 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 SPDYE5A6NIY4 337 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 CNMDO75829 334 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 P4HA1P13674 534 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 TSHRP16473 764 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 RPL7AP62424 266 aaKnown RBP13.36□□□□□ -0.27
PUDP-201ENST00000381077 ZNF252P-AS1Q0IIN9 211 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 ZNF268Q14587 947 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms