RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 NUDT5Q9UKK9 219 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 SPEF2Q9C093 1822 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 PJA2O43164 708 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 MED7O43513 233 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 HNRNPH3P31942 346 aaKnown RBP11.74□□□□□ -0.53
HDAC6-203ENST00000376619 DNAJC3Q13217 504 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 KIF22Q14807 665 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 PSMD6Q15008 389 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 HYIQ5T013 277 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 ERO1BQ86YB8 467 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 MAP4K3Q8IVH8 894 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 MCOLN2Q8IZK6 566 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 MCUQ8NE86 351 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 GPRC5AQ8NFJ5 357 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 MAML1Q92585 1016 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 SNF8Q96H20 258 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 CDC42EP4Q9H3Q1 356 aaKnown RBP11.74□□□□□ -0.53
HDAC6-203ENST00000376619 XPNPEP1Q9NQW7 623 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 SNTG2Q9NY99 539 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 UVRAGQ9P2Y5 699 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 CACNG4Q9UBN1 327 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 IP6K2Q9UHH9 426 aa11.74□□□□□ -0.53
HDAC6-203ENST00000376619 BNIP3LO60238 219 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 CPP00450 1065 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 ZNF157P51786 506 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-203ENST00000376619 EFNA5P52803 228 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 RABGGTBP53611 331 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 C15orf59Q2T9L4 293 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-203ENST00000376619 ARHGEF18Q6ZSZ5 1173 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 CENPUQ71F23 418 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 FAM131BQ86XD5 332 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 VPS52Q8N1B4 723 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 PRELID2Q8N945 189 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 APOL2Q9BQE5 337 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.73□□□□□ -0.531e-6■■■■■ 27.3
HDAC6-203ENST00000376619 TSR3Q9UJK0 312 aaKnown RBP11.73□□□□□ -0.53
HDAC6-203ENST00000376619 DNPEPQ9ULA0 475 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 TNPO2O14787 897 aaKnown RBP11.73□□□□□ -0.53
HDAC6-203ENST00000376619 MAFGO15525 162 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 HSPA6P17066 643 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 ADORA2AP29274 412 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 MXD4Q14582 209 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-203ENST00000376619 DCAF6Q58WW2 860 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 SPOUT1Q5T280 376 aaKnown RBP11.73□□□□□ -0.53
HDAC6-203ENST00000376619 TMEM192Q8IY95 271 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 ZNF784Q8NCA9 323 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-203ENST00000376619 KCNV2Q8TDN2 545 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 MCUR1Q96AQ8 359 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 DNAI2Q9GZS0 605 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 RNPEPQ9H4A4 650 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 SIX2Q9NPC8 291 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 R3HDM2Q9Y2K5 976 aaKnown RBP11.73□□□□□ -0.53
HDAC6-203ENST00000376619 MYH6P13533 1939 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 CASZ1Q86V15 1759 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 C10orf71Q711Q0 1435 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 ATP9BO43861 1147 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 HUS1O60921 280 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 CALB1P05937 261 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 GTF2BQ00403 316 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 C3orf62Q6ZUJ4 267 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 ACTL9Q8TC94 416 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 TGS1Q96RS0 853 aaKnown RBP11.73□□□□□ -0.53
HDAC6-203ENST00000376619 R3HDMLQ9H3Y0 253 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 SMYD3Q9H7B4 428 aa11.73□□□□□ -0.53
HDAC6-203ENST00000376619 KIAA0100Q14667 2235 aaKnown RBP11.73□□□□□ -0.53
HDAC6-203ENST00000376619 NFICP08651 508 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 FDX1P10109 184 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 RFC1P35251 1148 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-203ENST00000376619 HSD17B4P51659 736 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 TAS2R40P59535 323 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 ZNF844Q08AG5 666 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 FAM117BQ6P1L5 589 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 TADA2BQ86TJ2 420 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 CHST13Q8NET6 341 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 SPC25Q9HBM1 224 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 PNMA3Q9UL41 463 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 ZNF214Q9UL59 606 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-203ENST00000376619 IRS2Q9Y4H2 1338 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 DHX15O43143 795 aaKnown RBP11.72□□□□□ -0.53
HDAC6-203ENST00000376619 PRLRP16471 622 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 ARL4AP40617 200 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 NAMPTP43490 491 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 ADCY2Q08462 1091 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 SNAPC2Q13487 334 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 FYB2Q5VWT5 728 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 IER5Q5VY09 327 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 METTL7BQ6UX53 244 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 DNAJB3Q8WWF6 145 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 BHMTQ93088 406 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 RBM41Q96IZ5 413 aaKnown RBP11.72□□□□□ -0.53
HDAC6-203ENST00000376619 TSNARE1Q96NA8 513 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 UNKQ9C0B0 810 aaKnown RBP11.72□□□□□ -0.53
HDAC6-203ENST00000376619 VIPAS39Q9H9C1 493 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 ADARB2Q9NS39 739 aaKnown RBP11.72□□□□□ -0.53
HDAC6-203ENST00000376619 TJP2Q9UDY2 1190 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 PFASO15067 1338 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 I3L4J1 428 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 PDHXO00330 501 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 SSTR1P30872 391 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 IL9RQ01113 521 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms