RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 TSC22D3Q99576 134 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 KIAA1683Q9H0B3 1180 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 AGPAT3Q9NRZ7 376 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 SMARCAL1Q9NZC9 954 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 POLLQ9UGP5 575 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 TYK2P29597 1187 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 SERPINB9P50453 376 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 MAPRE2Q15555 327 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 ACAD10Q6JQN1 1059 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 DCUN1D1Q96GG9 259 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 FAM161BQ96MY7 647 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 RUSC1Q9BVN2 902 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 ABHD16BQ9H3Z7 469 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 ANLNQ9NQW6 1124 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 FNDC3AQ9Y2H6 1198 aaKnown RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 E5RI56 91 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 F5H423 210 aaPredicted RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 DFFAO00273 331 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 NAMPTP43490 491 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 CYP4A22Q5TCH4 519 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 MEI1Q5TIA1 1274 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 CDKAL1Q5VV42 579 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 XPO6Q96QU8 1125 aaKnown RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 HMX1Q9NP08 348 aaPredicted RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 DBR1Q9UK59 544 aaKnown RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 ALG6Q9Y672 507 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 PAX3P23760 479 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 HOXA10P31260 410 aaPredicted RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 KPNA1P52294 538 aaPredicted RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 TTC39BQ5VTQ0 682 aaPredicted RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 LRRC43Q8N309 656 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 KRT35Q92764 455 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 SLC7A5P2Q9GIP4 190 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 HLA-DRAP01903 254 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 COILP38432 576 aaPredicted RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 POLE2P56282 527 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 TPI1P60174 286 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 RPS6P62753 249 aaKnown RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 PCBP1Q15365 356 aaKnown RBP eCLIP11.5□□□□□ -0.574e-6■■■□□ 15.2
MDC1-201ENST00000376406 TDRD10Q5VZ19 366 aaKnown RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 PAPD7Q5XG87 772 aaKnown RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 TTI2Q6NXR4 508 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 ZNF512Q96ME7 567 aaPredicted RBP11.5□□□□□ -0.57
MDC1-201ENST00000376406 SPATC1LQ9H0A9 340 aa11.5□□□□□ -0.57
MDC1-201ENST00000376406 CFAP69A5D8W1 941 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 CYP11B2P19099 503 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 PCNX4Q63HM2 1172 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 TAF2Q6P1X5 1199 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 ITIH5Q86UX2 942 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 C3orf20Q8ND61 904 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 ICA1LQ8NDH6 482 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 FRMD8P1Q9BZ68 369 aaPredicted RBP11.49□□□□□ -0.57
MDC1-201ENST00000376406 PFDN1O60925 122 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 CYP2C8P10632 490 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 OR1G1P47890 313 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 FNTAP49354 379 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 CARSP49589 748 aaKnown RBP11.49□□□□□ -0.57
MDC1-201ENST00000376406 ZNF200P98182 395 aaPredicted RBP11.49□□□□□ -0.57
MDC1-201ENST00000376406 TMCO4Q5TGY1 634 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 TRIML2Q8N7C3 387 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 FGD4Q96M96 766 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 KIFC3Q9BVG8 833 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 PLEKHA5Q9HAU0 1116 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 MRGBPQ9NV56 204 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 MYH13Q9UKX3 1938 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 POLRMTO00411 1230 aaKnown RBP11.49□□□□□ -0.57
MDC1-201ENST00000376406 PLEKP08567 350 aaPredicted RBP11.49□□□□□ -0.57
MDC1-201ENST00000376406 SREBF1P36956 1147 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 HERVK_113P62684 666 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 HIPK4Q8NE63 616 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 AGAP1Q9UPQ3 857 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 A0A0A6YYK5 440 aaPredicted RBP11.49□□□□□ -0.57
MDC1-201ENST00000376406 THPOP40225 353 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 EFHC1Q5JVL4 640 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 MED1Q15648 1581 aaPredicted RBP11.49□□□□□ -0.57
MDC1-201ENST00000376406 UBE2Q2LH0YL09 131 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 RPL10AP62906 217 aaKnown RBP11.49□□□□□ -0.57
MDC1-201ENST00000376406 KDM7AQ6ZMT4 941 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 FEZF2Q8TBJ5 459 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 ZNF668Q96K58 619 aaPredicted RBP11.49□□□□□ -0.57
MDC1-201ENST00000376406 CARD9Q9H257 536 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 SEMA6BQ9H3T3 888 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 RSAD1Q9HA92 442 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 ZFATQ9P243 1243 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 ITGA8P53708 1063 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 PKN1Q16512 942 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 RTFDC1Q9BY42 306 aaPredicted RBP11.49□□□□□ -0.57
MDC1-201ENST00000376406 OSBPL8Q9BZF1 889 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 FAM50BQ9Y247 325 aa11.49□□□□□ -0.57
MDC1-201ENST00000376406 ARHGDIAP52565 204 aa11.48□□□□□ -0.57
MDC1-201ENST00000376406 PPIL2Q13356 520 aa11.48□□□□□ -0.57
MDC1-201ENST00000376406 NIPA1Q7RTP0 329 aa11.48□□□□□ -0.57
MDC1-201ENST00000376406 CATSPER1Q8NEC5 780 aa11.48□□□□□ -0.57
MDC1-201ENST00000376406 PNKPQ96T60 521 aa11.48□□□□□ -0.57
MDC1-201ENST00000376406 PAK5Q9P286 719 aa11.48□□□□□ -0.57
MDC1-201ENST00000376406 ABCC6O95255 1503 aa11.48□□□□□ -0.57
MDC1-201ENST00000376406 HSD17B3P37058 310 aa11.48□□□□□ -0.57
MDC1-201ENST00000376406 RAD23BP54727 409 aa11.48□□□□□ -0.57
MDC1-201ENST00000376406 TRADDQ15628 312 aa11.48□□□□□ -0.57
MDC1-201ENST00000376406 NOP9Q86U38 636 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms