RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 FMNL3Q8IVF7 1028 aa10.16□□□□□ -0.78
VTA1-201ENST00000367621 GLYCTKQ8IVS8 523 aa10.16□□□□□ -0.78
VTA1-201ENST00000367621 SCUBE3Q8IX30 993 aa10.16□□□□□ -0.78
VTA1-201ENST00000367621 CRIPAKQ8N1N5 446 aa10.16□□□□□ -0.78
VTA1-201ENST00000367621 BEST2Q8NFU1 509 aa10.16□□□□□ -0.78
VTA1-201ENST00000367621 GAD1Q99259 594 aa10.16□□□□□ -0.78
VTA1-201ENST00000367621 ZSWIM1Q9BR11 485 aa10.16□□□□□ -0.78
VTA1-201ENST00000367621 IFIH1Q9BYX4 1025 aaKnown RBP10.16□□□□□ -0.78
VTA1-201ENST00000367621 WNT8AQ9H1J5 351 aa10.16□□□□□ -0.78
VTA1-201ENST00000367621 SMYD3Q9H7B4 428 aa10.16□□□□□ -0.78
VTA1-201ENST00000367621 CISHQ9NSE2 258 aa10.16□□□□□ -0.78
VTA1-201ENST00000367621 TAS2R14Q9NYV8 317 aa10.16□□□□□ -0.78
VTA1-201ENST00000367621 SALL4Q9UJQ4 1053 aa10.16□□□□□ -0.78
VTA1-201ENST00000367621 NAGPAQ9UK23 515 aa10.16□□□□□ -0.78
VTA1-201ENST00000367621 PCDHB4Q9Y5E5 795 aa10.16□□□□□ -0.78
VTA1-201ENST00000367621 ENPP3O14638 875 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 OFD1O75665 1012 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 MMEP08473 750 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 CCDC172P0C7W6 258 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 KRT5P13647 590 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 LRPAP1P30533 357 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 MLH1P40692 756 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 USP8P40818 1118 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 RAP1GAPP47736 663 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 CDR2Q01850 454 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 SPA17Q15506 151 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 LRRC26Q2I0M4 334 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 WDR72Q3MJ13 1102 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 ZNF667Q5HYK9 610 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 ALKBH5Q6P6C2 394 aaKnown RBP10.15□□□□□ -0.78
VTA1-201ENST00000367621 TMEM270Q6UE05 265 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 CD300LGQ6UXG3 332 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 SCARA5Q6ZMJ2 495 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 UBE2Q1Q7Z7E8 422 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 RPUSD2Q8IZ73 545 aaKnown RBP10.15□□□□□ -0.78
VTA1-201ENST00000367621 LRRC52Q8N7C0 313 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 RBBP8NLQ8NC74 664 aaPredicted RBP10.15□□□□□ -0.78
VTA1-201ENST00000367621 DBF4BQ8NFT6 615 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 PAWRQ96IZ0 340 aaKnown RBP10.15□□□□□ -0.78
VTA1-201ENST00000367621 C16orf45Q96MC5 204 aaPredicted RBP10.15□□□□□ -0.78
VTA1-201ENST00000367621 TWNKQ96RR1 684 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 WDR24Q96S15 920 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.15□□□□□ -0.78
VTA1-201ENST00000367621 IMPG2Q9BZV3 1241 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 DEF6Q9H4E7 631 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 CYP3A43Q9HB55 503 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 GOLGA2P5Q9HBQ8 144 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 LZTFL1Q9NQ48 299 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 NXF1Q9UBU9 619 aaKnown RBP10.15□□□□□ -0.78
VTA1-201ENST00000367621 NME7Q9Y5B8 376 aa10.15□□□□□ -0.78
VTA1-201ENST00000367621 ATP8B3O60423 1300 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 GOLGA6L9A6NEM1 432 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 DCDC2CA8MYV0 355 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 TLR3O15455 904 aaKnown RBP10.14□□□□□ -0.79
VTA1-201ENST00000367621 CILPO75339 1184 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 TNNT1P13805 278 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 TNFAIP3P21580 790 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 CYP2C18P33260 490 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 SCNN1GP51170 649 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 RAD23BP54727 409 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 ETF1P62495 437 aaKnown RBP10.14□□□□□ -0.79
VTA1-201ENST00000367621 INCA1Q0VD86 236 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 PTPN14Q15678 1187 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 CLLU1OSQ5K130 101 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 CCDC122Q5T0U0 273 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 C10orf76Q5T2E6 689 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 TAF3Q5VWG9 929 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 SLC24A5Q71RS6 500 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 TFAP2BQ92481 460 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 SCLYQ96I15 445 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 ELOVL4Q9GZR5 314 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 ISCUQ9H1K1 167 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 HIPK3Q9H422 1215 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 C11orf49Q9H6J7 331 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 RSAD1Q9HA92 442 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 GDAP2Q9NXN4 497 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 CACNG4Q9UBN1 327 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 HMGXB4Q9UGU5 601 aa10.14□□□□□ -0.79
VTA1-201ENST00000367621 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.13□□□□□ -0.79
VTA1-201ENST00000367621 TRIM43BA6NCK2 446 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 BTNL10A8MVZ5 291 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 B4GALT3O60512 393 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 EOMESO95936 686 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 CYP1A1P04798 512 aaPredicted RBP10.13□□□□□ -0.79
VTA1-201ENST00000367621 THP07101 528 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 FGFR1P11362 822 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 GZMAP12544 262 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 SKIP12755 728 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 UNGP13051 313 aaPredicted RBP10.13□□□□□ -0.79
VTA1-201ENST00000367621 CD58P19256 250 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 ITGB8P26012 769 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 SSTR3P32745 418 aaPredicted RBP10.13□□□□□ -0.79
VTA1-201ENST00000367621 CCL23P55773 120 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 BPIFB4P59827 614 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 CLEC16AQ2KHT3 1053 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 SOWAHAQ2M3V2 549 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 FAM43BQ6ZT52 329 aaPredicted RBP10.13□□□□□ -0.79
VTA1-201ENST00000367621 KIAA1328Q86T90 577 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 ZNF677Q86XU0 584 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 HACE1Q8IYU2 909 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms