RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 SOD2P04179 222 aa19.11■□□□□ 0.65
SDCBP2-201ENST00000339987 TKTP29401 623 aaKnown RBP19.11■□□□□ 0.65
SDCBP2-201ENST00000339987 ZBED6P86452 979 aa19.11■□□□□ 0.65
SDCBP2-201ENST00000339987 SPAG5Q96R06 1193 aa19.11■□□□□ 0.65
SDCBP2-201ENST00000339987 C17orf80Q9BSJ5 609 aa19.11■□□□□ 0.65
SDCBP2-201ENST00000339987 NUCKS1Q9H1E3 243 aaKnown RBP19.11■□□□□ 0.65
SDCBP2-201ENST00000339987 BARX2Q9UMQ3 279 aaPredicted RBP19.11■□□□□ 0.65
SDCBP2-201ENST00000339987 LZTS1Q9Y250 596 aa19.11■□□□□ 0.65
SDCBP2-201ENST00000339987 LUC7L2Q9Y383 392 aaKnown RBP19.11■□□□□ 0.65
SDCBP2-201ENST00000339987 RNF225M0QZC1 329 aaPredicted RBP19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 CILPO75339 1184 aa19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 CD58P19256 250 aa19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 CASP14P31944 242 aa19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 LHX1P48742 406 aa19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 FXR1P51114 621 aaKnown RBP eCLIP19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 USP41Q3LFD5 358 aa19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 LRIT3Q3SXY7 679 aa19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 PDXDC1Q6P996 788 aa19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 UNC93AQ86WB7 457 aa19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 FMNL3Q8IVF7 1028 aa19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 GPR65Q8IYL9 337 aa19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 FAM71AQ8IYT1 594 aa19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 ZNF397Q8NF99 534 aaPredicted RBP19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 C11orf84Q9BUA3 381 aaPredicted RBP19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 SNX25Q9H3E2 840 aa19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 CHST7Q9NS84 486 aa19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 PCDHB4Q9Y5E5 795 aa19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 TIMM13Q9Y5L4 95 aaPredicted RBP19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 VWA8A3KMH1 1905 aa19.1■□□□□ 0.65
SDCBP2-201ENST00000339987 FOXN3O00409 490 aaPredicted RBP19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 OAZ2O95190 189 aa19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 DNAJB2P25686 324 aa19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 SOX5P35711 763 aa19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 GNL1P36915 607 aaPredicted RBP19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 STAT1P42224 750 aa19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 ZNF132P52740 706 aa19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 YWHAHQ04917 246 aaPredicted RBP19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 UBE3AQ05086 875 aa19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 MRPL58Q14197 206 aaKnown RBP19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 ARID5BQ14865 1188 aa19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 PPP2R2DQ66LE6 453 aa19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 OVOS1Q6IE37 1185 aa19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 TAS1R1Q7RTX1 841 aa19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 OSTM1Q86WC4 334 aa19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 OR6B3Q8NGW1 331 aa19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 CPLX3Q8WVH0 158 aa19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 TTPALQ9BTX7 342 aa19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 COLQQ9Y215 455 aaPredicted RBP19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 STXBP5LQ9Y2K9 1186 aa19.09■□□□□ 0.65
SDCBP2-201ENST00000339987 GOLGA6L6A8MZA4 724 aa19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 MFAP3LO75121 409 aa19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 KRT9P35527 623 aa19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 NDST1P52848 882 aa19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 RTP2Q5QGT7 225 aa19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 VARS2Q5ST30 1063 aaKnown RBP19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 SPRED2Q7Z698 418 aa19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 CNGA4Q8IV77 575 aa19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 SPC24Q8NBT2 197 aa19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 RBBP8NLQ8NC74 664 aaPredicted RBP19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 WHAMMQ8TF30 809 aa19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 SYN2Q92777 582 aaPredicted RBP19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 PDLIM2Q96JY6 352 aa19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 OXCT2Q9BYC2 517 aaPredicted RBP19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 DNAI2Q9GZS0 605 aa19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 SLC28A3Q9HAS3 691 aa19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 PUF60Q9UHX1 559 aaKnown RBP19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 NME7Q9Y5B8 376 aa19.08■□□□□ 0.65
SDCBP2-201ENST00000339987 LRRC53A6NM62 1247 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 AKR1B15C9JRZ8 316 aaPredicted RBP19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 H7C4K7 107 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 PCSK1P29120 753 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 DEKP35659 375 aaKnown RBP19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 GLUD2P49448 558 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 DSG1Q02413 1049 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 TMEM270Q6UE05 265 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 ANKS3Q6ZW76 656 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 CEP57Q86XR8 500 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 THEM5Q8N1Q8 247 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 FBXO22Q8NEZ5 403 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 PIK3R5Q8WYR1 880 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 TIFAQ96CG3 184 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 DNAJC7Q99615 494 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 RTP3Q9BQQ7 232 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 NT5C1AQ9BXI3 368 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 ELOVL4Q9GZR5 314 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 ZBP1Q9H171 429 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 DDX43Q9NXZ2 648 aaKnown RBP19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 AIPL1Q9NZN9 384 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 HMGXB4Q9UGU5 601 aa19.08■□□□□ 0.64
SDCBP2-201ENST00000339987 PLXNA4Q9HCM2 1894 aa19.07■□□□□ 0.64
SDCBP2-201ENST00000339987 A8MXQ7 604 aa19.07■□□□□ 0.64
SDCBP2-201ENST00000339987 URODP06132 367 aa19.07■□□□□ 0.64
SDCBP2-201ENST00000339987 PAEPP09466 180 aa19.07■□□□□ 0.64
SDCBP2-201ENST00000339987 PNMA6AP0CW24 399 aaPredicted RBP19.07■□□□□ 0.64
SDCBP2-201ENST00000339987 KRT5P13647 590 aa19.07■□□□□ 0.64
SDCBP2-201ENST00000339987 HNRNPH3P31942 346 aaKnown RBP19.07■□□□□ 0.64
SDCBP2-201ENST00000339987 USP8P40818 1118 aa19.07■□□□□ 0.64
SDCBP2-201ENST00000339987 RAD23BP54727 409 aa19.07■□□□□ 0.64
SDCBP2-201ENST00000339987 SFMBT2Q5VUG0 894 aa19.07■□□□□ 0.64
SDCBP2-201ENST00000339987 KIAA0319Q5VV43 1072 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms