RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 AGO4Q9HCK5 861 aaKnown RBP15.48■□□□□ 0.07
TCOF1-201ENST00000323668 DISP2A7MBM2 1401 aa15.48■□□□□ 0.07
TCOF1-201ENST00000323668 PABPN1LA6NDY0 278 aaKnown RBP15.48■□□□□ 0.07
TCOF1-201ENST00000323668 ERFP50548 548 aa15.48■□□□□ 0.07
TCOF1-201ENST00000323668 COG7P83436 770 aa15.48■□□□□ 0.07
TCOF1-201ENST00000323668 GABPAQ06546 454 aa15.48■□□□□ 0.07
TCOF1-201ENST00000323668 RRP1BQ14684 758 aaKnown RBP15.48■□□□□ 0.07
TCOF1-201ENST00000323668 SPOPLQ6IQ16 392 aa15.48■□□□□ 0.07
TCOF1-201ENST00000323668 TTC39CQ8N584 583 aa15.48■□□□□ 0.07
TCOF1-201ENST00000323668 GPRASP2Q96D09 838 aa15.48■□□□□ 0.07
TCOF1-201ENST00000323668 DHX35Q9H5Z1 703 aaKnown RBP15.48■□□□□ 0.07
TCOF1-201ENST00000323668 AVENQ9NQS1 362 aaPredicted RBP15.48■□□□□ 0.07
TCOF1-201ENST00000323668 SLC24A2Q9UI40 661 aa15.48■□□□□ 0.07
TCOF1-201ENST00000323668 APOL1O14791 398 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 SLURP2P0DP57 97 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 QPCTQ16769 361 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 PREPLQ4J6C6 727 aaPredicted RBP15.47■□□□□ 0.07
TCOF1-201ENST00000323668 HACE1Q8IYU2 909 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 FAM71DQ8N9W8 422 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 LRGUKQ96M69 825 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 GCOM2Q9BZD3 368 aaPredicted RBP15.47■□□□□ 0.07
TCOF1-201ENST00000323668 NEUROG2Q9H2A3 272 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 FAM47CQ5HY64 1035 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 PCNX4Q63HM2 1172 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 HEY2Q9UBP5 337 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 MARCOQ9UEW3 520 aaPredicted RBP15.47■□□□□ 0.07
TCOF1-201ENST00000323668 CLEC11AQ9Y240 323 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 PIK3CDO00329 1044 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 POLRMTO00411 1230 aaKnown RBP15.47■□□□□ 0.07
TCOF1-201ENST00000323668 TYK2P29597 1187 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 MMP13P45452 471 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 SULF1Q8IWU6 871 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 ABRAQ8N0Z2 381 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 GSDMBQ8TAX9 411 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 STX3Q13277 289 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 PTK6Q13882 451 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 CYP4A22Q5TCH4 519 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 FAM71AQ8IYT1 594 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 KIRREL3Q8IZU9 778 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 CERS5Q8N5B7 392 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 TMEM121Q9BTD3 319 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 PAK5Q9P286 719 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 KCPQ6ZWJ8 1503 aa15.47■□□□□ 0.07
TCOF1-201ENST00000323668 ENO4A6NNW6 628 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 SRGAP2BP0DMP2 458 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 STIP1P31948 543 aaKnown RBP15.46■□□□□ 0.07
TCOF1-201ENST00000323668 ALDH18A1P54886 795 aaKnown RBP15.46■□□□□ 0.07
TCOF1-201ENST00000323668 RGS9BPQ6ZS82 235 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 SLC26A7Q8TE54 656 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 CYP4F11Q9HBI6 524 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 MAP3K20Q9NYL2 800 aaKnown RBP15.46■□□□□ 0.07
TCOF1-201ENST00000323668 GSTA2P09210 222 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 ALDH5A1P51649 535 aaPredicted RBP15.46■□□□□ 0.07
TCOF1-201ENST00000323668 HIC1Q14526 733 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 DNAL1Q4LDG9 190 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 SYTL5Q8TDW5 730 aaPredicted RBP15.46■□□□□ 0.07
TCOF1-201ENST00000323668 CKAP2Q8WWK9 683 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 PPWD1Q96BP3 646 aaKnown RBP15.46■□□□□ 0.07
TCOF1-201ENST00000323668 LRRC19Q9H756 370 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 KLHL8Q9P2G9 620 aaPredicted RBP15.46■□□□□ 0.07
TCOF1-201ENST00000323668 ACTR2P61160 394 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 SLC35G1Q2M3R5 365 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 SIX6OS1Q8N1H7 587 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 ELMO3Q96BJ8 720 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 CCDC124Q96CT7 223 aaKnown RBP15.46■□□□□ 0.07
TCOF1-201ENST00000323668 ATG4CQ96DT6 458 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 WDR18Q9BV38 432 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 THEGQ9P2T0 379 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 ZNRF3Q9ULT6 936 aa15.46■□□□□ 0.07
TCOF1-201ENST00000323668 KPNA7A9QM74 516 aa15.46■□□□□ 0.06
TCOF1-201ENST00000323668 ZFXP17010 805 aaPredicted RBP15.46■□□□□ 0.06
TCOF1-201ENST00000323668 MXD4Q14582 209 aaPredicted RBP15.46■□□□□ 0.06
TCOF1-201ENST00000323668 SPOCD1Q6ZMY3 1216 aa15.46■□□□□ 0.06
TCOF1-201ENST00000323668 ART4Q93070 314 aa15.46■□□□□ 0.06
TCOF1-201ENST00000323668 FAM111AQ96PZ2 611 aa15.46■□□□□ 0.06
TCOF1-201ENST00000323668 IKZF4Q9H2S9 585 aa15.46■□□□□ 0.06
TCOF1-201ENST00000323668 TM4SF1P30408 202 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 C1QBPQ07021 282 aaKnown RBP15.45■□□□□ 0.06
TCOF1-201ENST00000323668 MDH1BQ5I0G3 518 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 EXOC3L1Q86VI1 746 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 LRRC6Q86X45 466 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 FBXO36Q8NEA4 188 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 SHC3Q92529 594 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 MTBPQ96DY7 904 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 VCPIP1Q96JH7 1222 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 THTPAQ9BU02 230 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 DCLRE1BQ9H816 532 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 ERVK-5Q9HDB9 667 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 C15orf41Q9Y2V0 281 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 TMEM150BA6NC51 233 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 TRPA1O75762 1119 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 RFC5P40937 340 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 IRX1P78414 480 aaPredicted RBP15.45■□□□□ 0.06
TCOF1-201ENST00000323668 DDR1Q08345 913 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 SLC15A2Q16348 729 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 SEZ6Q53EL9 994 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 RABGAP1LQ5R372 815 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 TMEM154Q6P9G4 183 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 ARMCX2Q7L311 632 aa15.45■□□□□ 0.06
TCOF1-201ENST00000323668 PDCD2LQ9BRP1 358 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms