RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 AFF1P51825 1210 aaKnown RBP13.85□□□□□ -0.19
VAMP7-201ENST00000262640 TERF1P54274 439 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 HADHBP55084 474 aaKnown RBP13.85□□□□□ -0.19
VAMP7-201ENST00000262640 LILRA4P59901 499 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 TLE2Q04725 743 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 TRIM60Q495X7 471 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 UNC93AQ86WB7 457 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 TPCN2Q8NHX9 752 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 ZNF653Q96CK0 615 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 TWNKQ96RR1 684 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 ZSWIM1Q9BR11 485 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 MRPL45Q9BRJ2 306 aaKnown RBP13.85□□□□□ -0.19
VAMP7-201ENST00000262640 ZNF518BQ9C0D4 1074 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 HIPK3Q9H422 1215 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 CEP83Q9Y592 693 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 CEP350Q5VT06 3117 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 GRID2IPA4D2P6 1211 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 ATP1A1P05023 1023 aaKnown RBP13.84□□□□□ -0.19
VAMP7-201ENST00000262640 CYP1A2P05177 515 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 CFHP08603 1231 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 VDRP11473 427 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 IBSPP21815 317 aaPredicted RBP13.84□□□□□ -0.19
VAMP7-201ENST00000262640 FAAP100Q0VG06 881 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 GPNMBQ14956 572 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 SOWAHAQ2M3V2 549 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 PAPD7Q5XG87 772 aaKnown RBP13.84□□□□□ -0.19
VAMP7-201ENST00000262640 LIMS2Q7Z4I7 341 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 PHF13Q86YI8 300 aaPredicted RBP13.84□□□□□ -0.19
VAMP7-201ENST00000262640 PASD1Q8IV76 773 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 MCOLN2Q8IZK6 566 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 CPA5Q8WXQ8 436 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 VCPIP1Q96JH7 1222 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 DNAI2Q9GZS0 605 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 CTTNBP2NLQ9P2B4 639 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 MRFAP1Q9Y605 127 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 PODXLO00592 558 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 ENC1O14682 589 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 HUS1O60921 280 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 FAM163BP0C2L3 166 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 HSPA1AP0DMV8 641 aaKnown RBP13.84□□□□□ -0.19
VAMP7-201ENST00000262640 HSPA1BP0DMV9 641 aaKnown RBP13.84□□□□□ -0.19
VAMP7-201ENST00000262640 CDH5P33151 784 aaPredicted RBP13.84□□□□□ -0.19
VAMP7-201ENST00000262640 AMPD2Q01433 879 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 SGO2Q562F6 1265 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 GLB1LQ6UWU2 654 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 DPH6Q7L8W6 267 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 SYCE1Q8N0S2 351 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 TOP6BLQ8N6T0 577 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 TMEM35BQ8NCS4 154 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 APPL2Q8NEU8 664 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 DIS3LQ8TF46 1054 aaKnown RBP13.84□□□□□ -0.19
VAMP7-201ENST00000262640 HEXIM2Q96MH2 286 aaKnown RBP13.84□□□□□ -0.19
VAMP7-201ENST00000262640 LHX5Q9H2C1 402 aa13.84□□□□□ -0.19
VAMP7-201ENST00000262640 MTA2O94776 668 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 ORC1Q13415 861 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 STILQ15468 1287 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 MON1BQ7L1V2 547 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 LRRC57Q8N9N7 239 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 DBF4BQ8NFT6 615 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 MYRIPQ8NFW9 859 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 DDX27Q96GQ7 796 aaKnown RBP13.83□□□□□ -0.2
VAMP7-201ENST00000262640 UROC1Q96N76 676 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 ELAC1Q9H777 363 aaKnown RBP13.83□□□□□ -0.2
VAMP7-201ENST00000262640 AVENQ9NQS1 362 aaPredicted RBP13.83□□□□□ -0.2
VAMP7-201ENST00000262640 UVRAGQ9P2Y5 699 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 CDC23Q9UJX2 597 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 INPP5FQ9Y2H2 1132 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 SCN1AP35498 2009 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 FAM170AA1A519 330 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 POMCP01189 267 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 PAX3P23760 479 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 SSTR3P32745 418 aaPredicted RBP13.83□□□□□ -0.2
VAMP7-201ENST00000262640 C1QBPQ07021 282 aaKnown RBP13.83□□□□□ -0.2
VAMP7-201ENST00000262640 CNGA2Q16280 664 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 LIN9Q5TKA1 542 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 OR6B3Q8NGW1 331 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 C11orf49Q9H6J7 331 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 OSGEPQ9NPF4 335 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 TMEM161AQ9NX61 479 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 CNOT8Q9UFF9 292 aaKnown RBP13.83□□□□□ -0.2
VAMP7-201ENST00000262640 L1RE1Q9UN81 338 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 SAR1BQ9Y6B6 198 aa13.83□□□□□ -0.2
VAMP7-201ENST00000262640 CXCL10P02778 98 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 WARSP23381 471 aaKnown RBP13.82□□□□□ -0.2
VAMP7-201ENST00000262640 CLCNKBP51801 687 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 TUSC3Q13454 348 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 UPP1Q16831 310 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 SLFN11Q7Z7L1 901 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 URGCPQ8TCY9 931 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 KBTBD7Q8WVZ9 684 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 SNX25Q9H3E2 840 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 ADAM22Q9P0K1 906 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.82□□□□□ -0.2
VAMP7-201ENST00000262640 COG5Q9UP83 839 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 ATP11BQ9Y2G3 1177 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 BRCA2P51587 3418 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 CASTOR2A6NHX0 329 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 O00370 1275 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 CYB561D2O14569 222 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 ENPP3O14638 875 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms