RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Gm7995L7N2E4 160 aa19.33■□□□□ 0.68
Trim47-202ENSMUST00000106441 Vps41Q5KU39 853 aa19.33■□□□□ 0.68
Trim47-202ENSMUST00000106441 Fstl1Q62356 306 aa19.33■□□□□ 0.68
Trim47-202ENSMUST00000106441 Agap1Q8BXK8 857 aaKnown RBP19.33■□□□□ 0.68
Trim47-202ENSMUST00000106441 Pnma1Q8C1C8 353 aa19.33■□□□□ 0.68
Trim47-202ENSMUST00000106441 Lrrc14Q8VC16 493 aa19.33■□□□□ 0.68
Trim47-202ENSMUST00000106441 Paip2Q9D6V8 124 aa19.33■□□□□ 0.68
Trim47-202ENSMUST00000106441 Eif4e3Q9DBB5 207 aa19.33■□□□□ 0.68
Trim47-202ENSMUST00000106441 Msgn1Q9JK54 188 aa19.33■□□□□ 0.68
Trim47-202ENSMUST00000106441 Zscan4-ps3A0A1B0GRH6 506 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Zscan4-ps2A0A1C7CYU6 506 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Gm7086A0A1W2P766 342 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Gm13084A2A8N0 494 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Zfp651E9PZ11 729 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Lta4hP24527 611 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 PklrP53657 574 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Grm1P97772 1199 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Tdrd5Q5VCS6 1040 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Ccdc80Q8R2G6 949 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 NcaldQ91X97 193 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Dusp21Q9D9D8 189 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Cyp39a1Q9JKJ9 470 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Znf394Q9Z1D9 521 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Gm9774A0A0A6YVU8 407 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Per1O35973 1291 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Tlk2O55047 718 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Birc5O70201 140 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Snx3O70492 162 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Sar1aP36536 198 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Adcy8P97490 1249 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Rnf10Q3UIW5 804 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Fam92bQ3V2J0 292 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Kctd19Q562E2 927 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Trim21Q62191 470 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Krt77Q6IFZ6 572 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Pak4Q8BTW9 593 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Lin7aQ8JZS0 233 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 GldcQ91W43 1025 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Sv2aQ9JIS5 742 aa19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Gys1Q9Z1E4 738 aaKnown RBP19.32■□□□□ 0.68
Trim47-202ENSMUST00000106441 Ms4a4aA0A087WRT7 236 aa19.31■□□□□ 0.68
Trim47-202ENSMUST00000106441 Fam155bA2BDP1 471 aa19.31■□□□□ 0.68
Trim47-202ENSMUST00000106441 PrkceP16054 737 aa19.31■□□□□ 0.68
Trim47-202ENSMUST00000106441 Cav1P49817 178 aa19.31■□□□□ 0.68
Trim47-202ENSMUST00000106441 Pfkfb2P70265 519 aa19.31■□□□□ 0.68
Trim47-202ENSMUST00000106441 Trim43bP86448 445 aa19.31■□□□□ 0.68
Trim47-202ENSMUST00000106441 Gbp1Q01514 589 aa19.31■□□□□ 0.68
Trim47-202ENSMUST00000106441 EnahQ03173 802 aa19.31■□□□□ 0.68
Trim47-202ENSMUST00000106441 Rufy4Q3TYX8 563 aa19.31■□□□□ 0.68
Trim47-202ENSMUST00000106441 AmphQ7TQF7 686 aa19.31■□□□□ 0.68
Trim47-202ENSMUST00000106441 Bmp3Q8BHE5 468 aa19.31■□□□□ 0.68
Trim47-202ENSMUST00000106441 Scrn2Q8VCA8 425 aa19.31■□□□□ 0.68
Trim47-202ENSMUST00000106441 GneQ91WG8 722 aaKnown RBP19.31■□□□□ 0.68
Trim47-202ENSMUST00000106441 Bzw1Q9CQC6 419 aaKnown RBP19.31■□□□□ 0.68
Trim47-202ENSMUST00000106441 Sf3a3Q9D554 501 aaKnown RBP19.31■□□□□ 0.68
Trim47-202ENSMUST00000106441 Trip11E9Q512 1976 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Myh9Q8VDD5 1960 aaKnown RBP19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Ephb2P54763 986 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Cops2P61202 443 aaKnown RBP19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Trim72Q1XH17 477 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Cnga4Q3UW12 575 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 SnphQ80U23 495 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Q8BGN9 141 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Map1sQ8C052 973 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Cabs1Q8C633 391 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Tas1r3Q925D8 858 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Ankef1Q9D2J7 775 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Rab11fip1Q9D620 645 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Nsmce1Q9D720 266 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Tex9Q9D845 387 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Pdk2Q9JK42 407 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Abcb11Q9QY30 1321 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 MafbP54841 323 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Creb1Q01147 341 aaKnown RBP19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Spink5Q148R4 1017 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Ccdc85aQ5SP85 500 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Podnl1Q6P3Y9 559 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Pramel7Q810Y8 479 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Znf445Q8R2V3 986 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Pqbp1Q91VJ5 263 aaKnown RBP19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 BrdtQ91Y44 956 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Xpo5Q924C1 1204 aaKnown RBP19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Isl2Q9CXV0 359 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Wdr83Q9DAJ4 315 aaKnown RBP19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Ptgdr2Q9Z2J6 382 aa19.3■□□□□ 0.68
Trim47-202ENSMUST00000106441 Plxnb3Q9QY40 1902 aa19.29■□□□□ 0.68
Trim47-202ENSMUST00000106441 Znf804aA2AKY4 1200 aa19.29■□□□□ 0.68
Trim47-202ENSMUST00000106441 Ttll6A4Q9E8 822 aa19.29■□□□□ 0.68
Trim47-202ENSMUST00000106441 Gm5926E9PWJ8 236 aa19.29■□□□□ 0.68
Trim47-202ENSMUST00000106441 Gm21973F6WEZ7 68 aa19.29■□□□□ 0.68
Trim47-202ENSMUST00000106441 CflarO35732 481 aa19.29■□□□□ 0.68
Trim47-202ENSMUST00000106441 Rhox5P52651 210 aa19.29■□□□□ 0.68
Trim47-202ENSMUST00000106441 Aars2Q14CH7 980 aa19.29■□□□□ 0.68
Trim47-202ENSMUST00000106441 Fam81aQ3UXZ6 364 aa19.29■□□□□ 0.68
Trim47-202ENSMUST00000106441 Trim80Q3V061 624 aa19.29■□□□□ 0.68
Trim47-202ENSMUST00000106441 Serpinb3dQ6UKZ0 387 aa19.29■□□□□ 0.68
Trim47-202ENSMUST00000106441 Sestd1Q80UK0 696 aa19.29■□□□□ 0.68
Trim47-202ENSMUST00000106441 Tor4aQ8BH02 426 aa19.29■□□□□ 0.68
Trim47-202ENSMUST00000106441 Ipo5Q8BKC5 1097 aaKnown RBP19.29■□□□□ 0.68
Trim47-202ENSMUST00000106441 Zfp120Q8BZW4 436 aa19.29■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms