RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 NUBP1P53384 320 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 AMPD3Q01432 767 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 MORC3Q14149 939 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 TPGS2Q68CL5 300 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 CNNM4Q6P4Q7 775 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 GET4Q7L5D6 327 aaPredicted RBP11.46□□□□□ -0.57
LITAF-216ENST00000574848 DHX40Q8IX18 779 aaKnown RBP11.46□□□□□ -0.57
LITAF-216ENST00000574848 TCEAL8Q8IYN2 117 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 APPL2Q8NEU8 664 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 BEST2Q8NFU1 509 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 SPATA20Q8TB22 786 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 ERCC4Q92889 916 aaPredicted RBP11.46□□□□□ -0.57
LITAF-216ENST00000574848 PAGE5Q96GU1 130 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 MRFAP1L1Q96HT8 127 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 PRRX2Q99811 253 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 OXCT2Q9BYC2 517 aaPredicted RBP11.46□□□□□ -0.57
LITAF-216ENST00000574848 KBTBD4Q9NVX7 518 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 FBXL5Q9UKA1 691 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 DOCK6Q96HP0 2047 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 ANO9A1A5B4 782 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 CCL16O15467 120 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 OAZ2O95190 189 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 NFICP08651 508 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 LAMP2P13473 410 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 FSHRP23945 695 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 ERCC5P28715 1186 aaPredicted RBP11.45□□□□□ -0.58
LITAF-216ENST00000574848 ADSSP30520 456 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 PPP1R2P41236 205 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 CASP5P51878 434 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 VCPP55072 806 aaKnown RBP11.45□□□□□ -0.58
LITAF-216ENST00000574848 SPAG1Q07617 926 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 DPYDQ12882 1025 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 HTR4Q13639 388 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 JADE1Q6IE81 842 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 CRELD2Q6UXH1 353 aaPredicted RBP11.45□□□□□ -0.58
LITAF-216ENST00000574848 GRASPQ7Z6J2 395 aaPredicted RBP11.45□□□□□ -0.58
LITAF-216ENST00000574848 PIAS4Q8N2W9 510 aaPredicted RBP11.45□□□□□ -0.58
LITAF-216ENST00000574848 MRPL44Q9H9J2 332 aaKnown RBP11.45□□□□□ -0.58
LITAF-216ENST00000574848 MAN1B1Q9UKM7 699 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 AGO2Q9UKV8 859 aaKnown RBP11.45□□□□□ -0.58
LITAF-216ENST00000574848 CDH7Q9ULB5 785 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 EXOC7Q9UPT5 735 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 ZKSCAN5Q9Y2L8 839 aa11.45□□□□□ -0.58
LITAF-216ENST00000574848 PIRO00625 290 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 PDGFBP01127 241 aaPredicted RBP11.44□□□□□ -0.58
LITAF-216ENST00000574848 TYMPP19971 482 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 GARTP22102 1010 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 HOXD11P31277 338 aaPredicted RBP11.44□□□□□ -0.58
LITAF-216ENST00000574848 AFMP43652 599 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 ACOT2P49753 483 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 YWHAHQ04917 246 aaPredicted RBP11.44□□□□□ -0.58
LITAF-216ENST00000574848 KCNA1Q09470 495 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 TMEM132DQ14C87 1099 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 CTXN3Q4LDR2 81 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 C9orf57Q5W0N0 161 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 CWF19L1Q69YN2 538 aaKnown RBP11.44□□□□□ -0.58
LITAF-216ENST00000574848 NT5DC4Q86YG4 428 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 TMEM130Q8N3G9 435 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 PRSS33Q8NF86 280 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 ACCSQ96QU6 501 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 TRIM9Q9C026 710 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 IKZF4Q9H2S9 585 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 DNMT3BQ9UBC3 853 aaKnown RBP11.44□□□□□ -0.58
LITAF-216ENST00000574848 AFF4Q9UHB7 1163 aaKnown RBP11.44□□□□□ -0.58
LITAF-216ENST00000574848 PCDHB13Q9Y5F0 798 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 INSL5Q9Y5Q6 135 aa11.44□□□□□ -0.58
LITAF-216ENST00000574848 SCN1AP35498 2009 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 OR6C75A6NL08 312 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 PPEF2O14830 753 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 NRDCO43847 1150 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 IL18RAPO95256 599 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 GCNT3O95395 438 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 CYP11A1P05108 521 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 PRR29P0C7W0 189 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 SRFP11831 508 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 IDEP14735 1019 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 AVPR2P30518 371 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 GUCY2FP51841 1108 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 LILRA4P59901 499 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 NTHL1P78549 312 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 NHLH1Q02575 133 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 STIM1Q13586 685 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 PABPC1LQ4VXU2 614 aaKnown RBP11.43□□□□□ -0.58
LITAF-216ENST00000574848 IER5LQ5T953 404 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 BRSK2Q8IWQ3 736 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 NPAS3Q8IXF0 933 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 CCDC65Q8IXS2 484 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 EFCAB13Q8IY85 973 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 SLC44A3Q8N4M1 653 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 ENOX1Q8TC92 643 aaKnown RBP11.43□□□□□ -0.58
LITAF-216ENST00000574848 RSAD2Q8WXG1 361 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 POMGNT1Q8WZA1 660 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 FGF13Q92913 245 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 FGFBP2Q9BYJ0 223 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 TMEM206Q9H813 350 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 SLC2A4RGQ9NR83 387 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 PANK4Q9NVE7 773 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 HCFC1R1Q9NWW0 138 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 WNT16Q9UBV4 365 aa11.43□□□□□ -0.58
LITAF-216ENST00000574848 UBE4BO95155 1302 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms