RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 PSMD5Q16401 504 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 VARS2Q5ST30 1063 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 KRT39Q6A163 491 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 SLC8B1Q6J4K2 584 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 LILRA6Q6PI73 481 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 DSTYKQ6XUX3 929 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 CEP57Q86XR8 500 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 IRF2BP1Q8IU81 584 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 TMEM86AQ8N2M4 240 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 TOP6BLQ8N6T0 577 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 HDAC7Q8WUI4 952 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 RIN2Q8WYP3 895 aaPredicted RBP10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 PABPC5Q96DU9 382 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 HPDLQ96IR7 371 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 FAM84AQ96KN4 292 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 B3GALT6Q96L58 329 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 THAP9Q9H5L6 903 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 R3HCC1Q9Y3T6 440 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 C2CD2LO14523 706 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 GABRDO14764 452 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 PER2O15055 1255 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 P4HA2O15460 535 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 ABLIM3O94929 683 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 GLP2RO95838 553 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 ASS1P00966 412 aaKnown RBP10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 ADH1AP07327 375 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 TRIM49P0CI25 452 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 TRIM49CP0CI26 452 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 CCDC192P0DO97 292 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 LTBRP36941 435 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 CLCN4P51793 760 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 MYL6P60660 151 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 NCOA4Q13772 614 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 SGSM1Q2NKQ1 1148 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 PRSS55Q6UWB4 352 aaPredicted RBP10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 RTL10Q7L3V2 364 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 BPIFA3Q9BQP9 254 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 MAFFQ9ULX9 164 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 COG5Q9UP83 839 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 HCFC2Q9Y5Z7 792 aa10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 SPTBN5Q9NRC6 3674 aaKnown RBP10.35□□□□□ -0.75
RABGGTA-221ENST00000561055 OBSL1O75147 1896 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 TCF20Q9UGU0 1960 aaKnown RBP10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 DOCK8Q8NF50 2099 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 OR6C75A6NL08 312 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 HUS1O60921 280 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 PHACTR2O75167 634 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 TACC1O75410 805 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 HLA-DRAP01903 254 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 KLRC2P26717 231 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 OR1D2P34982 312 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 GTF2F1P35269 517 aaKnown RBP eCLIP10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 GCLMP48507 274 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 FMO5P49326 533 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 MXI1P50539 228 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 BIRC3Q13489 604 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 TRPC3Q13507 836 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 CCDC85BQ15834 202 aaPredicted RBP10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 SOWAHAQ2M3V2 549 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 CCDC40Q4G0X9 1142 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 OVOS1Q6IE37 1185 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 ZNF280DQ6N043 979 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 RSPO2Q6UXX9 243 aaPredicted RBP10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 C11orf57Q6ZUT1 292 aaPredicted RBP10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 RBM23Q86U06 439 aaKnown RBP10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 METTL23Q86XA0 190 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 FAM114A1Q8IWE2 563 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 MICALL1Q8N3F8 863 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 FBXL13Q8NEE6 735 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 VN1R2Q8NFZ6 395 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 ZNF461Q8TAF7 563 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 TAS1R2Q8TE23 839 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 CASP10Q92851 521 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 RHOBTB2Q9BYZ6 727 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 PLEKHA4Q9H4M7 779 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 FAM124BQ9H5Z6 455 aaPredicted RBP10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 DPP7Q9UHL4 492 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 FBXL5Q9UKA1 691 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 L1RE1Q9UN81 338 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 SNX9Q9Y5X1 595 aa10.34□□□□□ -0.75
RABGGTA-221ENST00000561055 PATJQ8NI35 1801 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 ANAPC1Q9H1A4 1944 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 LINC01565O15544 149 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 ADAM12O43184 909 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 TGM5O43548 720 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 N4BP1O75113 896 aaKnown RBP10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 TBX10O75333 385 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 GLUD1P00367 558 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 SRGAP2BP0DMP2 458 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 HOXB8P17481 243 aaPredicted RBP10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 RPL17P18621 184 aaKnown RBP10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 WARSP23381 471 aaKnown RBP10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 EEF1GP26641 437 aaKnown RBP10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 LHX1P48742 406 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 ROR1Q01973 937 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 KCNH2Q12809 1159 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 SMARCB1Q12824 385 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 NCAPHQ15003 741 aa10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 TPD52L1Q16890 204 aaPredicted RBP10.33□□□□□ -0.76
RABGGTA-221ENST00000561055 WDR72Q3MJ13 1102 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms