RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 RARBP10826 455 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 HSPA6P17066 643 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 BMP5P22003 454 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 CXCR5P32302 372 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 IL12RB1P42701 662 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 ANXA11P50995 505 aaKnown RBP4.33□□□□□ -1.72
SPG11-206ENST00000558093 SEC24CP53992 1094 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 MRPS35P82673 323 aaKnown RBP4.33□□□□□ -1.72
SPG11-206ENST00000558093 ZNF267Q14586 743 aaPredicted RBP4.33□□□□□ -1.72
SPG11-206ENST00000558093 CD300EQ496F6 205 aaPredicted RBP4.33□□□□□ -1.72
SPG11-206ENST00000558093 Q6ZNX1 250 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 PCSK9Q8NBP7 692 aaKnown RBP4.33□□□□□ -1.72
SPG11-206ENST00000558093 GPR150Q8NGU9 434 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 LINC00476Q8WZB0 136 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 CDK5RAP3Q96JB5 506 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 CNPPD1Q9BV87 410 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 CNNM1Q9NRU3 951 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 INTS13Q9NVM9 706 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 PNPOQ9NVS9 261 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 SYBUQ9NX95 663 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 ZIM2Q9NZV7 527 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 ZDHHC8Q9ULC8 765 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 PCDHA1Q9Y5I3 950 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 M0QYG6 137 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 ORC4O43929 436 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 PEX1O43933 1283 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 ESRRBO95718 433 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 TYRP14679 529 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 PROZP22891 400 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 MC2RQ01718 297 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 SCAPQ12770 1279 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 SF3B3Q15393 1217 aaKnown RBP4.32□□□□□ -1.72
SPG11-206ENST00000558093 PLEKHG6Q3KR16 790 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 SP5Q6BEB4 398 aaPredicted RBP4.32□□□□□ -1.72
SPG11-206ENST00000558093 PCSK4Q6UW60 755 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 SLC30A10Q6XR72 485 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 ADGRG5Q8IZF4 528 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 B3GALNT2Q8NCR0 500 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 ACTRT2Q8TDY3 377 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 SLC9A6Q92581 669 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 HPS3Q969F9 1004 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 FUBP1Q96AE4 644 aaKnown RBP4.32□□□□□ -1.72
SPG11-206ENST00000558093 C1GALT1C1Q96EU7 318 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 SLC35A4Q96G79 324 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 TINAGL1Q9GZM7 467 aaPredicted RBP4.32□□□□□ -1.72
SPG11-206ENST00000558093 CDH19Q9H159 772 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 SARS2Q9NP81 518 aaKnown RBP4.32□□□□□ -1.72
SPG11-206ENST00000558093 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.32□□□□□ -1.72
SPG11-206ENST00000558093 KCTD5Q9NXV2 234 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 CTTNBP2NLQ9P2B4 639 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 STXBP5LQ9Y2K9 1186 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 EPN1Q9Y6I3 576 aaPredicted RBP4.32□□□□□ -1.72
SPG11-206ENST00000558093 COL4A3Q01955 1670 aa4.32□□□□□ -1.72
SPG11-206ENST00000558093 MAST3O60307 1309 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 E9PLN8 166 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 VPS4BO75351 444 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 SUN1O94901 812 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 MATN4O95460 622 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 LMNAP02545 664 aaKnown RBP4.31□□□□□ -1.72
SPG11-206ENST00000558093 AHSGP02765 367 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 CHRM3P20309 590 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 PLA2G5P39877 138 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 NPTX2P47972 431 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 KCNJ5P48544 419 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 POU6F2P78424 691 aaPredicted RBP4.31□□□□□ -1.72
SPG11-206ENST00000558093 EXOSC9Q06265 439 aaKnown RBP4.31□□□□□ -1.72
SPG11-206ENST00000558093 FOXI1Q12951 378 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 DYRK1AQ13627 763 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 KIF22Q14807 665 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 ATAT1Q5SQI0 421 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 STRIP1Q5VSL9 837 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 FAM90A1Q86YD7 464 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 DENND1CQ8IV53 801 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 TPH2Q8IWU9 490 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 ANKRD13AQ8IZ07 590 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 TOR1AIP2Q8NFQ8 470 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 DDX17Q92841 729 aaKnown RBP4.31□□□□□ -1.72
SPG11-206ENST00000558093 CGRRF1Q99675 332 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 VKORC1Q9BQB6 163 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 HEPHQ9BQS7 1158 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 RTFDC1Q9BY42 306 aaPredicted RBP4.31□□□□□ -1.72
SPG11-206ENST00000558093 MRPL46Q9H2W6 279 aaKnown RBP4.31□□□□□ -1.72
SPG11-206ENST00000558093 RIOX1Q9H6W3 641 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 ARMT1Q9H993 441 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 GPR35Q9HC97 309 aa4.31□□□□□ -1.72
SPG11-206ENST00000558093 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 E7ENX8 843 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 KIAA0355O15063 1070 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 YY2O15391 372 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 KIF20AO95235 890 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 ALDH2P05091 517 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 ITGALP20701 1170 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 SOX8P57073 446 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 TAP2Q03519 686 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 PLS1Q14651 629 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 OLFML1Q6UWY5 402 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 MICALCLQ6ZW33 695 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 PPP1R3BQ86XI6 285 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 DNAJC10Q8IXB1 793 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms