RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 FAM78AQ5JUQ0 283 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 TPRG1Q6ZUI0 275 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 USP49Q70CQ1 688 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 ITIH5Q86UX2 942 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 NT5DC4Q86YG4 428 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 HS6ST3Q8IZP7 471 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 SYCP3Q8IZU3 236 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 THEM5Q8N1Q8 247 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 ASB16Q96NS5 453 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 CLIC6Q96NY7 704 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 ACCSQ96QU6 501 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 LTB4R2Q9NPC1 389 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 SPATA6Q9NWH7 488 aaPredicted RBP13.8□□□□□ -0.2
LINC00643-202ENST00000553426 DPP3Q9NY33 737 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 DLGAP2Q9P1A6 1054 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 HSFX1Q9UBD0 423 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 ASB3Q9Y575 518 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 STYXL1Q9Y6J8 313 aa13.8□□□□□ -0.2
LINC00643-202ENST00000553426 MAN2B1O00754 1011 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 LAMTOR5O43504 91 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 GCNT3O95395 438 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 LDHAP00338 332 aaKnown RBP13.79□□□□□ -0.2
LINC00643-202ENST00000553426 LMNAP02545 664 aaKnown RBP13.79□□□□□ -0.2
LINC00643-202ENST00000553426 IDEP14735 1019 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 PSMC3P17980 439 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 CCR2P41597 374 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 TUFMP49411 452 aaKnown RBP13.79□□□□□ -0.2
LINC00643-202ENST00000553426 TAF6P49848 677 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 FOXK2Q01167 660 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 ALCAMQ13740 583 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 SLC39A14Q15043 492 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 TAF12Q16514 161 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 CENPPQ6IPU0 288 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 YAF2Q8IY57 180 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 ADSSL1Q8N142 457 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 TMEM130Q8N3G9 435 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 ZSCAN18Q8TBC5 510 aaPredicted RBP13.79□□□□□ -0.2
LINC00643-202ENST00000553426 FAM200AQ8TCP9 573 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 DEPDC1BQ8WUY9 529 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 BORCS6Q96GS4 357 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 ZNF560Q96MR9 790 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 PLA2G2FQ9BZM2 168 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 LRRC27Q9C0I9 530 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 HEBP1Q9NRV9 189 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 NOTCH4Q99466 2003 aa13.79□□□□□ -0.2
LINC00643-202ENST00000553426 RIF1Q5UIP0 2472 aaKnown RBP13.79□□□□□ -0.2
LINC00643-202ENST00000553426 ANO9A1A5B4 782 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 MTMR11A4FU01 709 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 MYMKA6NI61 221 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 TISP43B9A030 160 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 CYB561D2O14569 222 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 PPEF2O14830 753 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 STX6O43752 255 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 CYP11A1P05108 521 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 SP9P0CG40 484 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 CD72P21854 359 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 GDI1P31150 447 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 PNPLA4P41247 253 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 SMARCB1Q12824 385 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 GRM2Q14416 872 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 VEPH1Q14D04 833 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 STK38Q15208 465 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 TEAD2Q15562 447 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 SV2CQ496J9 727 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 ARHGAP15Q53QZ3 475 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 L1TD1Q5T7N2 865 aaKnown RBP13.78□□□□□ -0.2
LINC00643-202ENST00000553426 FAM173BQ6P4H8 233 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 STXBP4Q6ZWJ1 553 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 ATAD1Q8NBU5 361 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 C2orf15Q8WU43 125 aaKnown RBP13.78□□□□□ -0.2
LINC00643-202ENST00000553426 CACTINQ8WUQ7 758 aaKnown RBP13.78□□□□□ -0.2
LINC00643-202ENST00000553426 PYM1Q9BRP8 204 aaKnown RBP13.78□□□□□ -0.2
LINC00643-202ENST00000553426 PANK2Q9BZ23 570 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 TRPV4Q9HBA0 871 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 OLFML3Q9NRN5 406 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 TBC1D7Q9P0N9 293 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 SLC27A5Q9Y2P5 690 aa13.78□□□□□ -0.2
LINC00643-202ENST00000553426 R3HCC1Q9Y3T6 440 aaKnown RBP13.78□□□□□ -0.2
LINC00643-202ENST00000553426 MORC2Q9Y6X9 1032 aaPredicted RBP13.78□□□□□ -0.2
LINC00643-202ENST00000553426 A0A1W2PRU2 124 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 K7ELQ4 463 aaPredicted RBP13.77□□□□□ -0.21
LINC00643-202ENST00000553426 DPYSL4O14531 572 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 ZNF263O14978 683 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 SPTLC1O15269 473 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 LRRN2O75325 713 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 PPP1R37O75864 691 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 GLULP15104 373 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 GJA1P17302 382 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 FCARP24071 287 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 TFAMQ00059 246 aaKnown RBP13.77□□□□□ -0.21
LINC00643-202ENST00000553426 SLC39A12Q504Y0 691 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 MFSD6LQ8IWD5 586 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 CCDC65Q8IXS2 484 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 DCP1BQ8IZD4 617 aaKnown RBP13.77□□□□□ -0.21
LINC00643-202ENST00000553426 CSGALNACT1Q8TDX6 532 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 PSMG2Q969U7 264 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 DNAJC19Q96DA6 116 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 ZSWIM3Q96MP5 696 aa13.77□□□□□ -0.21
LINC00643-202ENST00000553426 ZNF396Q96N95 335 aaPredicted RBP13.77□□□□□ -0.21
LINC00643-202ENST00000553426 GCNAQ96QF7 691 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms