RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 TAF6P49848 677 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 GUCY2FP51841 1108 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 SMARCB1Q12824 385 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 TANGO2Q6ICL3 276 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 USP49Q70CQ1 688 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 ITIH5Q86UX2 942 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 THEM5Q8N1Q8 247 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 KCNG4Q8TDN1 519 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 IRF7Q92985 503 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 TCEAL4Q96EI5 215 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 BORCS6Q96GS4 357 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 ZNF560Q96MR9 790 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 PGLYRP2Q96PD5 576 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 ACCSQ96QU6 501 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 TRPV4Q9HBA0 871 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 LTB4R2Q9NPC1 389 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 OLFML3Q9NRN5 406 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 CEP72Q9P209 647 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 PCDHB13Q9Y5F0 798 aa14.2□□□□□ -0.14
RTN3-213ENST00000543552 ANO9A1A5B4 782 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 ANKRD63C9JTQ0 380 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 PIRO00625 290 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 LAMTOR5O43504 91 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 GCNT3O95395 438 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 LDHAP00338 332 aaKnown RBP14.19□□□□□ -0.14
RTN3-213ENST00000543552 LMNAP02545 664 aaKnown RBP14.19□□□□□ -0.14
RTN3-213ENST00000543552 CYP11A1P05108 521 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 OR4Q2P0C623 313 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 PSMC3P17980 439 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 FCARP24071 287 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 PNPLA4P41247 253 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 CCR2P41597 374 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 TUFMP49411 452 aaKnown RBP14.19□□□□□ -0.14
RTN3-213ENST00000543552 CEBPZQ03701 1054 aaKnown RBP14.19□□□□□ -0.14
RTN3-213ENST00000543552 DUSP4Q13115 394 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 VEPH1Q14D04 833 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 SLC39A14Q15043 492 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 ZNF528Q3MIS6 628 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 SV2CQ496J9 727 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 L1TD1Q5T7N2 865 aaKnown RBP14.19□□□□□ -0.14
RTN3-213ENST00000543552 CENPPQ6IPU0 288 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 STXBP4Q6ZWJ1 553 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 HS6ST3Q8IZP7 471 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 SYCP3Q8IZU3 236 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 ZSCAN18Q8TBC5 510 aaPredicted RBP14.19□□□□□ -0.14
RTN3-213ENST00000543552 C2orf15Q8WU43 125 aaKnown RBP14.19□□□□□ -0.14
RTN3-213ENST00000543552 LRRC27Q9C0I9 530 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 TRPV5Q9NQA5 729 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 SPATA6Q9NWH7 488 aaPredicted RBP14.19□□□□□ -0.14
RTN3-213ENST00000543552 DPP3Q9NY33 737 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 FBXO4Q9UKT5 387 aa14.19□□□□□ -0.14
RTN3-213ENST00000543552 MTMR11A4FU01 709 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 MYMKA6NI61 221 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 K7ELQ4 463 aaPredicted RBP14.18□□□□□ -0.14
RTN3-213ENST00000543552 CYB561D2O14569 222 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 PPEF2O14830 753 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 STX6O43752 255 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 PPP1R37O75864 691 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 SP9P0CG40 484 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 IDEP14735 1019 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 RPS9P46781 194 aaKnown RBP14.18□□□□□ -0.14
RTN3-213ENST00000543552 ARHGAP15Q53QZ3 475 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 C1orf228Q6PIY5 440 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 YAF2Q8IY57 180 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 ADSSL1Q8N142 457 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 PSMG2Q969U7 264 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 MSANTD3Q96H12 275 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 CLIC6Q96NY7 704 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 GCNAQ96QF7 691 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 IER2Q9BTL4 223 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 PLA2G2FQ9BZM2 168 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 TMEM206Q9H813 350 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 FRYLO94915 3013 aa14.18□□□□□ -0.14
RTN3-213ENST00000543552 GVINP1Q7Z2Y8 2422 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 TISP43B9A030 160 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 ZNF263O14978 683 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 SPTLC1O15269 473 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 PDIA4P13667 645 aaKnown RBP14.17□□□□□ -0.14
RTN3-213ENST00000543552 GLULP15104 373 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 GARTP22102 1010 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 GDI1P31150 447 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 GRM2Q14416 872 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 PPP2R5DQ14738 602 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 STK38Q15208 465 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 TEAD2Q15562 447 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 SLC39A12Q504Y0 691 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 FAM173BQ6P4H8 233 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 VITQ6UXI7 678 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 MFSD6LQ8IWD5 586 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 CCDC65Q8IXS2 484 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 SHKBP1Q8TBC3 707 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 FAM200AQ8TCP9 573 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 SPPL2BQ8TCT7 592 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 CACTINQ8WUQ7 758 aaKnown RBP14.17□□□□□ -0.14
RTN3-213ENST00000543552 CLDN23Q96B33 292 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 DNAJC19Q96DA6 116 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 SEPT5Q99719 369 aaPredicted RBP14.17□□□□□ -0.14
RTN3-213ENST00000543552 PYM1Q9BRP8 204 aaKnown RBP14.17□□□□□ -0.14
RTN3-213ENST00000543552 FAM213AQ9BRX8 229 aa14.17□□□□□ -0.14
RTN3-213ENST00000543552 STRA6Q9BX79 667 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms