RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 PTPN20Q4JDL3 420 aa11.28□□□□□ -0.6
CALU-206ENST00000542996 SWT1Q5T5J6 900 aaKnown RBP11.28□□□□□ -0.6
CALU-206ENST00000542996 CAPN12Q6ZSI9 719 aa11.28□□□□□ -0.6
CALU-206ENST00000542996 CCDC25Q86WR0 208 aa11.28□□□□□ -0.6
CALU-206ENST00000542996 AGAP11Q8TF27 550 aa11.28□□□□□ -0.6
CALU-206ENST00000542996 CNKSR1Q969H4 720 aa11.28□□□□□ -0.6
CALU-206ENST00000542996 L3MBTL3Q96JM7 780 aaPredicted RBP11.28□□□□□ -0.6
CALU-206ENST00000542996 PTPRHQ9HD43 1115 aa11.28□□□□□ -0.6
CALU-206ENST00000542996 TMPRSS4Q9NRS4 437 aa11.28□□□□□ -0.6
CALU-206ENST00000542996 SPENQ96T58 3664 aaKnown RBP11.28□□□□□ -0.6
CALU-206ENST00000542996 SLC26A4O43511 780 aa11.27□□□□□ -0.6
CALU-206ENST00000542996 SKAP2O75563 359 aaPredicted RBP11.27□□□□□ -0.6
CALU-206ENST00000542996 ASMTLO95671 621 aa11.27□□□□□ -0.6
CALU-206ENST00000542996 PRKCGP05129 697 aa11.27□□□□□ -0.6
CALU-206ENST00000542996 RPL13P26373 211 aaKnown RBP11.27□□□□□ -0.6
CALU-206ENST00000542996 GCLCP48506 637 aaPredicted RBP11.27□□□□□ -0.6
CALU-206ENST00000542996 KRT39Q6A163 491 aa11.27□□□□□ -0.6
CALU-206ENST00000542996 FAM83AQ86UY5 434 aa11.27□□□□□ -0.6
CALU-206ENST00000542996 FBXL13Q8NEE6 735 aa11.27□□□□□ -0.6
CALU-206ENST00000542996 ERMNQ8TAM6 284 aa11.27□□□□□ -0.6
CALU-206ENST00000542996 PPM1EQ8WY54 764 aa11.27□□□□□ -0.6
CALU-206ENST00000542996 CHMP6Q96FZ7 201 aa11.27□□□□□ -0.6
CALU-206ENST00000542996 CPXM1Q96SM3 734 aa11.27□□□□□ -0.6
CALU-206ENST00000542996 SGIP1Q9BQI5 828 aa11.27□□□□□ -0.6
CALU-206ENST00000542996 PDGFCQ9NRA1 345 aa11.27□□□□□ -0.6
CALU-206ENST00000542996 ZNF112Q9UJU3 913 aa11.27□□□□□ -0.6
CALU-206ENST00000542996 GOLGA8SH3BPF8 625 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 GOLGA8MH3BSY2 632 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 TULP1O00294 542 aaPredicted RBP11.27□□□□□ -0.61
CALU-206ENST00000542996 TTC4O95801 387 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 RABGGTBP53611 331 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 MYL6P60660 151 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 DENND1BQ6P3S1 775 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 RNF111Q6ZNA4 994 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 UNC45BQ8IWX7 931 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 SYCP3Q8IZU3 236 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 MTMR12Q9C0I1 747 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 KIAA1586Q9HCI6 787 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.27□□□□□ -0.61
CALU-206ENST00000542996 TMEM191CA6NGB0 347 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 SPATA31C2B4DYI2 1134 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 TMEM191BP0C7N4 346 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 MMP8P22894 467 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 OLIG2Q13516 323 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 RFWD3Q6PCD5 774 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 EEPD1Q7L9B9 569 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 TTC7BQ86TV6 843 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 ZNF606Q8WXB4 792 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 ATP6V0A4Q9HBG4 840 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 SLC17A7Q9P2U7 560 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 MCM8Q9UJA3 840 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 CXorf49A8MYA2 514 aaPredicted RBP11.27□□□□□ -0.61
CALU-206ENST00000542996 ALADP13716 330 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 SSTR1P30872 391 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 GRIA1P42261 906 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 PRKG1Q13976 671 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 LRRC71Q8N4P6 559 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 HVCN1Q96D96 273 aa11.27□□□□□ -0.61
CALU-206ENST00000542996 KLF6Q99612 283 aaPredicted RBP11.27□□□□□ -0.61
CALU-206ENST00000542996 MCM3P25205 808 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 CDKN2BP42772 138 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 ZKSCAN8Q15776 578 aaPredicted RBP11.26□□□□□ -0.61
CALU-206ENST00000542996 ERICH1Q86X53 443 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 SLITRK1Q96PX8 696 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 ANLNQ9NQW6 1124 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 UBE4BO95155 1302 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 CCT8L1PA6NM43 557 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 LIASO43766 372 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 ZBTB7AO95365 584 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 ADORA2AP29274 412 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 PSMC5P62195 406 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 PTK6Q13882 451 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 E2F5Q15329 346 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 MTERF2Q49AM1 385 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 LARGE2Q8N3Y3 721 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 SUPT20HQ8NEM7 779 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 CENPTQ96BT3 561 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 CLMNQ96JQ2 1002 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 CEP170P1Q96L14 293 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 ACCSQ96QU6 501 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 KCND2Q9NZV8 630 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 PGK2P07205 417 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 RNASEH2BQ5TBB1 312 aaKnown RBP11.26□□□□□ -0.61
CALU-206ENST00000542996 TMEM270Q6UE05 265 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 IPO4Q8TEX9 1081 aaKnown RBP11.26□□□□□ -0.61
CALU-206ENST00000542996 NRG4Q8WWG1 115 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 SENP7Q9BQF6 1050 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 POLR3FQ9H1D9 316 aaPredicted RBP11.26□□□□□ -0.61
CALU-206ENST00000542996 GOPCQ9HD26 462 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 RNF146Q9NTX7 359 aa11.26□□□□□ -0.61
CALU-206ENST00000542996 UTP11Q9Y3A2 253 aaKnown RBP11.26□□□□□ -0.61
CALU-206ENST00000542996 UBA1P22314 1058 aaKnown RBP11.25□□□□□ -0.61
CALU-206ENST00000542996 BNIP1Q12981 228 aa11.25□□□□□ -0.61
CALU-206ENST00000542996 EP400NLQ6ZTU2 488 aa11.25□□□□□ -0.61
CALU-206ENST00000542996 ZNF534Q76KX8 674 aa11.25□□□□□ -0.61
CALU-206ENST00000542996 NEK9Q8TD19 979 aa11.25□□□□□ -0.61
CALU-206ENST00000542996 ZNF419Q96HQ0 510 aaPredicted RBP11.25□□□□□ -0.61
CALU-206ENST00000542996 MRPL11Q9Y3B7 192 aaKnown RBP11.25□□□□□ -0.61
CALU-206ENST00000542996 LRCH4O75427 683 aa11.25□□□□□ -0.61
CALU-206ENST00000542996 FARP2O94887 1054 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms