RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 PYGBP11216 843 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 MEI1Q5TIA1 1274 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 DBR1Q9UK59 544 aaKnown RBP11.74□□□□□ -0.53
LINC00346-201ENST00000538077 SLC30A1Q9Y6M5 507 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 SPTLC1O15269 473 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 RFC5P40937 340 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 KCNB1Q14721 858 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 IGDCC4Q8TDY8 1250 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 FAM136AQ96C01 138 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 SHCBP1LQ9BZQ2 653 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 GPRC5CQ9NQ84 441 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 PDXKO00764 312 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 CSDE1O75534 798 aaKnown RBP11.74□□□□□ -0.53
LINC00346-201ENST00000538077 IL18RAPO95256 599 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 PNMA6AP0CW24 399 aaPredicted RBP11.74□□□□□ -0.53
LINC00346-201ENST00000538077 VCAM1P19320 739 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 GUF1Q8N442 669 aaKnown RBP11.74□□□□□ -0.53
LINC00346-201ENST00000538077 TTC39CQ8N584 583 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 ELMO3Q96BJ8 720 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 C6orf203Q9P0P8 240 aaPredicted RBP11.74□□□□□ -0.53
LINC00346-201ENST00000538077 SPATA31A5Q5VU36 1347 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 SPATA31A7Q8IWB4 1347 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 ODC1P11926 461 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 ACTR2P61160 394 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 WASHC5Q12768 1159 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 NYAP2Q9P242 653 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 POLLQ9UGP5 575 aa11.74□□□□□ -0.53
LINC00346-201ENST00000538077 EXTL3O43909 919 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 ORC2Q13416 577 aaPredicted RBP11.73□□□□□ -0.53
LINC00346-201ENST00000538077 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.73□□□□□ -0.53
LINC00346-201ENST00000538077 CDV3Q9UKY7 258 aaKnown RBP11.73□□□□□ -0.53
LINC00346-201ENST00000538077 RPS6P62753 249 aaKnown RBP11.73□□□□□ -0.53
LINC00346-201ENST00000538077 PLEKHH3Q7Z736 793 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 PPP1R13LQ8WUF5 828 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 KAT2BQ92831 832 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 AKT1S1Q96B36 256 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 PRMT6Q96LA8 375 aaPredicted RBP11.73□□□□□ -0.53
LINC00346-201ENST00000538077 GLT1D1Q96MS3 346 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 C17orf80Q9BSJ5 609 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 TMEM161AQ9NX61 479 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 CHMP2BQ9UQN3 213 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 MYO3AQ8NEV4 1616 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 CASTOR2A6NHX0 329 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 PQBP1O60828 265 aaKnown RBP11.73□□□□□ -0.53
LINC00346-201ENST00000538077 NPM3O75607 178 aaKnown RBP11.73□□□□□ -0.53
LINC00346-201ENST00000538077 DGKIO75912 1065 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 CHRM3P20309 590 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 GPD1P21695 349 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 CLCN3P51790 818 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 PPP2R2AP63151 447 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 KDSRQ06136 332 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 NBPF9Q3BBW0 867 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 C2CD6Q53TS8 623 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 RNF168Q8IYW5 571 aaPredicted RBP11.73□□□□□ -0.53
LINC00346-201ENST00000538077 ACER1Q8TDN7 264 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 AGPAT5Q9NUQ2 364 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 ITSN1Q15811 1721 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 CHST13Q8NET6 341 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 MYCBPQ99417 103 aaPredicted RBP11.73□□□□□ -0.53
LINC00346-201ENST00000538077 AK9Q5TCS8 1911 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 GRID2IPA4D2P6 1211 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 MAGEB2O15479 319 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 SLC9A1P19634 815 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 SOX10P56693 466 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 CDC42EP1Q00587 391 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 EMBQ6PCB8 327 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 MIB1Q86YT6 1006 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 CEP70Q8NHQ1 597 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 EXOC4Q96A65 974 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 BPIFA3Q9BQP9 254 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 TARS2Q9BW92 718 aaKnown RBP11.73□□□□□ -0.53
LINC00346-201ENST00000538077 TAF1DQ9H5J8 278 aaPredicted RBP11.73□□□□□ -0.53
LINC00346-201ENST00000538077 CATSPERBQ9H7T0 1116 aa11.73□□□□□ -0.53
LINC00346-201ENST00000538077 ZNF263O14978 683 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 SLC37A4O43826 429 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 TCN1P20061 433 aaPredicted RBP11.72□□□□□ -0.53
LINC00346-201ENST00000538077 MAP3K7CLP57077 242 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 LAMC2Q13753 1193 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 CHP1Q99653 195 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 HBP1O60381 514 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 DPYDQ12882 1025 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 DENND5BQ6ZUT9 1274 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 MTBPQ96DY7 904 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 RUSC1Q9BVN2 902 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 NPHS2Q9NP85 383 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 PNMA8BQ9ULN7 279 aaPredicted RBP11.72□□□□□ -0.53
LINC00346-201ENST00000538077 TFR2Q9UP52 801 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 FAM180AQ6UWF9 173 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 C4orf33Q8N1A6 199 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 FAM71DQ8N9W8 422 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 SNX5Q9Y5X3 404 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 FAM200BP0CF97 657 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 DMC1Q14565 340 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 SF3B3Q15393 1217 aaKnown RBP11.72□□□□□ -0.53
LINC00346-201ENST00000538077 LY6KQ17RY6 165 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 CALR3Q96L12 384 aaKnown RBP11.72□□□□□ -0.53
LINC00346-201ENST00000538077 PLA2G12BQ9BX93 195 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 TRIM9Q9C026 710 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 MAPK9P45984 424 aa11.72□□□□□ -0.53
LINC00346-201ENST00000538077 PLIN5Q00G26 463 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms