RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 NT5DC4Q86YG4 428 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 DEPDC1BQ8WUY9 529 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 POMGNT1Q8WZA1 660 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 SENP8Q96LD8 212 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 ASB16Q96NS5 453 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 TRMT61BQ9BVS5 477 aaKnown RBP14.21□□□□□ -0.13
RTN3-207ENST00000536011 SLITRK6Q9H5Y7 841 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 BRD9Q9H8M2 597 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 DLGAP2Q9P1A6 1054 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 STYXL1Q9Y6J8 313 aa14.21□□□□□ -0.13
RTN3-207ENST00000536011 PTPRZ1P23471 2315 aaPredicted RBP14.21□□□□□ -0.13
RTN3-207ENST00000536011 MIA3Q5JRA6 1907 aa14.21□□□□□ -0.14
RTN3-207ENST00000536011 FAM186AA6NE01 2351 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 FAM170BA6NMN3 283 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 MAN2B1O00754 1011 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 STAT6P42226 847 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 TAF6P49848 677 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 GUCY2FP51841 1108 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 SMARCB1Q12824 385 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 TANGO2Q6ICL3 276 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 USP49Q70CQ1 688 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 ITIH5Q86UX2 942 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 THEM5Q8N1Q8 247 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 KCNG4Q8TDN1 519 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 IRF7Q92985 503 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 TCEAL4Q96EI5 215 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 BORCS6Q96GS4 357 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 ZNF560Q96MR9 790 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 PGLYRP2Q96PD5 576 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 ACCSQ96QU6 501 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 TRPV4Q9HBA0 871 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 LTB4R2Q9NPC1 389 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 OLFML3Q9NRN5 406 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 CEP72Q9P209 647 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 FARP1Q9Y4F1 1045 aaPredicted RBP14.2□□□□□ -0.14
RTN3-207ENST00000536011 PCDHB13Q9Y5F0 798 aa14.2□□□□□ -0.14
RTN3-207ENST00000536011 ANO9A1A5B4 782 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 ANKRD63C9JTQ0 380 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 PIRO00625 290 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 LAMTOR5O43504 91 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 GCNT3O95395 438 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 LDHAP00338 332 aaKnown RBP14.19□□□□□ -0.14
RTN3-207ENST00000536011 LMNAP02545 664 aaKnown RBP14.19□□□□□ -0.14
RTN3-207ENST00000536011 CYP11A1P05108 521 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 OR4Q2P0C623 313 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 PSMC3P17980 439 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 FCARP24071 287 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 PNPLA4P41247 253 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 CCR2P41597 374 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 TUFMP49411 452 aaKnown RBP14.19□□□□□ -0.14
RTN3-207ENST00000536011 CEBPZQ03701 1054 aaKnown RBP14.19□□□□□ -0.14
RTN3-207ENST00000536011 DUSP4Q13115 394 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 VEPH1Q14D04 833 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 SLC39A14Q15043 492 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 ZNF528Q3MIS6 628 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 SV2CQ496J9 727 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 L1TD1Q5T7N2 865 aaKnown RBP14.19□□□□□ -0.14
RTN3-207ENST00000536011 CENPPQ6IPU0 288 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 STXBP4Q6ZWJ1 553 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 HS6ST3Q8IZP7 471 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 SYCP3Q8IZU3 236 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 ZSCAN18Q8TBC5 510 aaPredicted RBP14.19□□□□□ -0.14
RTN3-207ENST00000536011 C2orf15Q8WU43 125 aaKnown RBP14.19□□□□□ -0.14
RTN3-207ENST00000536011 LRRC27Q9C0I9 530 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 TRPV5Q9NQA5 729 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 SPATA6Q9NWH7 488 aaPredicted RBP14.19□□□□□ -0.14
RTN3-207ENST00000536011 DPP3Q9NY33 737 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 FBXO4Q9UKT5 387 aa14.19□□□□□ -0.14
RTN3-207ENST00000536011 MTMR11A4FU01 709 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 MYMKA6NI61 221 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 K7ELQ4 463 aaPredicted RBP14.18□□□□□ -0.14
RTN3-207ENST00000536011 CYB561D2O14569 222 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 PPEF2O14830 753 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 STX6O43752 255 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 PPP1R37O75864 691 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 SP9P0CG40 484 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 IDEP14735 1019 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 RPS9P46781 194 aaKnown RBP14.18□□□□□ -0.14
RTN3-207ENST00000536011 ARHGAP15Q53QZ3 475 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 C1orf228Q6PIY5 440 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 YAF2Q8IY57 180 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 ADSSL1Q8N142 457 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 PSMG2Q969U7 264 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 MSANTD3Q96H12 275 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 CLIC6Q96NY7 704 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 GCNAQ96QF7 691 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 IER2Q9BTL4 223 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 PLA2G2FQ9BZM2 168 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 TMEM206Q9H813 350 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 FRYLO94915 3013 aa14.18□□□□□ -0.14
RTN3-207ENST00000536011 GVINP1Q7Z2Y8 2422 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 TISP43B9A030 160 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 ZNF263O14978 683 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 SPTLC1O15269 473 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 PDIA4P13667 645 aaKnown RBP14.17□□□□□ -0.14
RTN3-207ENST00000536011 GLULP15104 373 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 GARTP22102 1010 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 GDI1P31150 447 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 GRM2Q14416 872 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 PPP2R5DQ14738 602 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms