RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 ASB16Q96NS5 453 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 DDX23Q9BUQ8 820 aaKnown RBP14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 CCSER1Q9C0I3 900 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 ATXN3LQ9H3M9 355 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 HSFX1Q9UBD0 423 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 C2CD2Q9Y426 696 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 PCDHB13Q9Y5F0 798 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 PIAS3Q9Y6X2 628 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 CITO14578 2027 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 CACNA1HO95180 2353 aa14.33□□□□□ -0.11
CLSTN3-205ENST00000535452 A0A0B4J269 797 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 TBC1D4O60343 1298 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 IDEP14735 1019 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 CD72P21854 359 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 CDC25CP30307 473 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 TNFSF9P41273 254 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 CCR3P51677 355 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 ZNF131P52739 623 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 GTF2BQ00403 316 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 AMPD2Q01433 879 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 TSPY1Q01534 308 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 POU5F1Q01860 360 aaKnown RBP14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 ALCAMQ13740 583 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 TEAD2Q15562 447 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 ENOX2Q16206 610 aaKnown RBP14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 ARSHQ5FYA8 562 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 PRSS36Q5K4E3 855 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 JADE1Q6IE81 842 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 MAP4K3Q8IVH8 894 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 NOC3LQ8WTT2 800 aaKnown RBP14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 KCNN1Q92952 543 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 SENP8Q96LD8 212 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 C8orf33Q9H7E9 229 aaPredicted RBP14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 TRPV5Q9NQA5 729 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 ZSCAN32Q9NX65 697 aa14.33□□□□□ -0.12
CLSTN3-205ENST00000535452 ZFHX2Q9C0A1 2572 aaPredicted RBP14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 A0A1W2PRU2 124 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 CYB561D2O14569 222 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 GCNT3O95395 438 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 STAT6P42226 847 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 ACOT2P49753 483 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 LILRA4P59901 499 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 C9orf57Q5W0N0 161 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 DYMQ7RTS9 669 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 MFSD6LQ8IWD5 586 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 KIAA2013Q8IYS2 634 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 HS6ST3Q8IZP7 471 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 TCEAL4Q96EI5 215 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 ACCSQ96QU6 501 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 PYM1Q9BRP8 204 aaKnown RBP14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 ZNF334Q9HCZ1 680 aaPredicted RBP14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 DPP3Q9NY33 737 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 DLGAP2Q9P1A6 1054 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 CPSF3Q9UKF6 684 aaKnown RBP14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 MYH11P35749 1972 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 WDFY4Q6ZS81 3184 aa14.32□□□□□ -0.12
CLSTN3-205ENST00000535452 VWA8A3KMH1 1905 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 DOCK8Q8NF50 2099 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 HEPACAM2A8MVW5 462 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 OR4Q2P0C623 313 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 IGFBP6P24592 240 aaPredicted RBP14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 TARSP26639 723 aaKnown RBP14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 GABRR2P28476 465 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 NMT1P30419 496 aaKnown RBP14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 AVPR1AP37288 418 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 EPHA5P54756 1037 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 PLCB2Q00722 1185 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 MYL7Q01449 175 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 SLC39A12Q504Y0 691 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 ARHGAP29Q52LW3 1261 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 GPR158Q5T848 1215 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 CENPPQ6IPU0 288 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 CC2D1AQ6P1N0 951 aaPredicted RBP14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 SPPL2BQ8TCT7 592 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 PSMG2Q969U7 264 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 ST6GALNAC4Q9H4F1 302 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 TMEM206Q9H813 350 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 CEP72Q9P209 647 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 SLC27A5Q9Y2P5 690 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 MYH15Q9Y2K3 1946 aa14.31□□□□□ -0.12
CLSTN3-205ENST00000535452 MTMR11A4FU01 709 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 CHADO15335 359 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 HUS1O60921 280 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 LRRN2O75325 713 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 HSP90AA1P07900 732 aaKnown RBP14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 NFICP08651 508 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 GJA1P17302 382 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 AARSP49588 968 aaKnown RBP eCLIP14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 MLLT6P55198 1093 aaPredicted RBP14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 TFAMQ00059 246 aaKnown RBP14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 AMPD3Q01432 767 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 CEBPZQ03701 1054 aaKnown RBP14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 BFSP1Q12934 665 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 PUM1Q14671 1186 aaKnown RBP eCLIP14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 ZBTB6Q15916 424 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 NFE2Q16621 373 aaPredicted RBP14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 DGKKQ5KSL6 1271 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 VITQ6UXI7 678 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 DGLUCYQ7Z3D6 616 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 DNAJB7Q7Z6W7 309 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms