RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 IGSF9Q9P2J2 1179 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 GRHPRQ9UBQ7 328 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 ZNF69Q9UC07 566 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 FAM184BQ9ULE4 1060 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 JAG2Q9Y219 1238 aa4.18□□□□□ -1.74
HMGN1P28-201ENST00000521340 FFAR2O15552 330 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 TXNP10599 105 aaKnown RBP4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 BTF3P20290 206 aaKnown RBP4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 SLC6A2P23975 617 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 SERPINF1P36955 418 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 CLRN1P58418 232 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 NOMO3P69849 1222 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 SLFN5Q08AF3 891 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 HABP2Q14520 560 aaPredicted RBP4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 PFKFB4Q16877 469 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 PRR16Q569H4 304 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 FCRL6Q6DN72 434 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 ZDHHC24Q6UX98 284 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 DOK3Q7L591 496 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 UBE3BQ7Z3V4 1068 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 KRT28Q7Z3Y7 464 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 TMPRSS9Q7Z410 1059 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 SYT12Q8IV01 421 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 KBTBD2Q8IY47 623 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 SMAP1Q8IYB5 467 aaPredicted RBP4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 MYCT1Q8N699 235 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 LINC01356Q8N9X3 169 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 GLIS1Q8NBF1 620 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 TMIEQ8NEW7 156 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 OR5M3Q8NGP4 307 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 CXorf38Q8TB03 319 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 FEZF2Q8TBJ5 459 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 STT3BQ8TCJ2 826 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 KLHL32Q96NJ5 620 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 SPATA5L1Q9BVQ7 753 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 TMEM120AQ9BXJ8 343 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 GSTO2Q9H4Y5 243 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 TMEM8AQ9HCN3 771 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 XPNPEP3Q9NQH7 507 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 C9orf78Q9NZ63 289 aaPredicted RBP4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 GJD2Q9UKL4 321 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 MAN2B2Q9Y2E5 1009 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 ZDHHC9Q9Y397 364 aa4.17□□□□□ -1.74
HMGN1P28-201ENST00000521340 CCDC78A2IDD5 438 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 MBD3L4A6NDZ8 208 aaPredicted RBP4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 MBD3L3A6NE82 208 aaPredicted RBP4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 MROH6A6NGR9 719 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 PYCARD-AS1I3L0S3 204 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 M0R3H8 397 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 UNC5CO95185 931 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 AMHP03971 560 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 SNRPA1P09661 255 aaKnown RBP4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 ATP5JP18859 108 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 MAPK10P53779 464 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 UCP3P55916 312 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 ICA1Q05084 483 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 PTK2BQ14289 1009 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 RALBP1Q15311 655 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 ZACNQ401N2 412 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 CCDC38Q502W7 563 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 UTP14CQ5TAP6 766 aaKnown RBP4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 DCAF12L1Q5VU92 463 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 C1QL3Q5VWW1 255 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 TANGO2Q6ICL3 276 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 LIN54Q6MZP7 749 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 JMJD6Q6NYC1 403 aaPredicted RBP4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 ZNF529Q6P280 563 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 PGBD2Q6P3X8 592 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 DRICH1Q6PGQ1 229 aaPredicted RBP4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 ZNF783Q6ZMS7 281 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 USP37Q86T82 979 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 XYLT1Q86Y38 959 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 CPXCR1Q8N123 301 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 CCDC33Q8N5R6 958 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 DNAJC5GQ8N7S2 189 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 ZNF527Q8NB42 609 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 SPATA5Q8NB90 893 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 SYT8Q8NBV8 401 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 OR52N2Q8NGI0 321 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 SCAMP4Q969E2 229 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 LCORQ96JN0 433 aaPredicted RBP4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 HEPHQ9BQS7 1158 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 MESP1Q9BRJ9 268 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 CPEB1Q9BZB8 566 aaKnown RBP4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 MEGF9Q9H1U4 602 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 MAGEH1Q9H213 219 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 BRD9Q9H8M2 597 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 OBP2BQ9NPH6 170 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 A1CFQ9NQ94 594 aaKnown RBP4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 ETAA1Q9NY74 926 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 CFAP97Q9P2B7 532 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 SRRDQ9UH36 339 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 PNMA2Q9UL42 364 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 SLC39A10Q9ULF5 831 aa4.16□□□□□ -1.74
HMGN1P28-201ENST00000521340 LGALS16A8MUM7 142 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 B5MCH6 92 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 SYT5O00445 386 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 HNRNPDLO14979 420 aaKnown RBP4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 DCLK1O15075 740 aa4.15□□□□□ -1.75
HMGN1P28-201ENST00000521340 KIAA0391O15091 583 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms