RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 CYB5RLQ6IPT4 315 aa7.13□□□□□ -1.27
NIPBL-205ENST00000505998 TUBA3EQ6PEY2 450 aa7.13□□□□□ -1.27
NIPBL-205ENST00000505998 PPP1R3BQ86XI6 285 aa7.13□□□□□ -1.27
NIPBL-205ENST00000505998 PDSS2Q86YH6 399 aa7.13□□□□□ -1.27
NIPBL-205ENST00000505998 PLBD2Q8NHP8 589 aa7.13□□□□□ -1.27
NIPBL-205ENST00000505998 MARS2Q96GW9 593 aaKnown RBP7.13□□□□□ -1.27
NIPBL-205ENST00000505998 CCDC136Q96JN2 1154 aa7.13□□□□□ -1.27
NIPBL-205ENST00000505998 PNKPQ96T60 521 aa7.13□□□□□ -1.27
NIPBL-205ENST00000505998 B3GNT5Q9BYG0 378 aa7.13□□□□□ -1.27
NIPBL-205ENST00000505998 ZNF341Q9BYN7 854 aa7.13□□□□□ -1.27
NIPBL-205ENST00000505998 FAM204AQ9H8W3 233 aa7.13□□□□□ -1.27
NIPBL-205ENST00000505998 AKIP1Q9NQ31 210 aa7.13□□□□□ -1.27
NIPBL-205ENST00000505998 CNNM1Q9NRU3 951 aa7.13□□□□□ -1.27
NIPBL-205ENST00000505998 RLIMQ9NVW2 624 aa7.13□□□□□ -1.27
NIPBL-205ENST00000505998 ZDHHC8Q9ULC8 765 aa7.13□□□□□ -1.27
NIPBL-205ENST00000505998 FPGT-TNNI3KV9GXZ4 949 aa7.13□□□□□ -1.27
NIPBL-205ENST00000505998 NCOA2Q15596 1464 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 FRMPD2Q68DX3 1309 aaPredicted RBP7.12□□□□□ -1.27
NIPBL-205ENST00000505998 KRTAP4-8A0A0G2JLE6 195 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 A0A1B0GTW7 788 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 NCR1O76036 304 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 PHKA1P46020 1223 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 PSMC1P62191 440 aaKnown RBP7.12□□□□□ -1.27
NIPBL-205ENST00000505998 FAM189BP81408 668 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 MXRA7P84157 204 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 SLFN5Q08AF3 891 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 PUM1Q14671 1186 aaKnown RBP eCLIP7.12□□□□□ -1.27
NIPBL-205ENST00000505998 LSM12Q3MHD2 195 aaKnown RBP7.12□□□□□ -1.27
NIPBL-205ENST00000505998 FOXR2Q6PJQ5 311 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 NPNTQ6UXI9 565 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 MAPKAPK5Q8IW41 473 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 SYNE4Q8N205 404 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 SLC17A8Q8NDX2 589 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 C8orf48Q96LL4 319 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 KLHL32Q96NJ5 620 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 ZSWIM1Q9BR11 485 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 IMPG2Q9BZV3 1241 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 VPS11Q9H270 941 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 TMEM60Q9H2L4 133 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 STAP2Q9UGK3 403 aa7.12□□□□□ -1.27
NIPBL-205ENST00000505998 AATKQ6ZMQ8 1374 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 FAM227AF5H4B4 570 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 MATN4O95460 622 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 GPANK1O95872 356 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 AHSGP02765 367 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 HLA-DOAP06340 250 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 RARBP10826 455 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 LAG3P18627 525 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 FGFR4P22455 802 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 AGFG1P52594 562 aaKnown RBP7.11□□□□□ -1.27
NIPBL-205ENST00000505998 GBX1Q14549 363 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 KIF22Q14807 665 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 GRM3Q14832 879 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 LLGL1Q15334 1064 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 KHDC1LQ5JSQ8 128 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 TMIEQ8NEW7 156 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 RNF181Q9P0P0 153 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 USP25Q9UHP3 1055 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 CPA4Q9UI42 421 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 PCDHA6Q9UN73 950 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 CDYLQ9Y232 598 aa7.11□□□□□ -1.27
NIPBL-205ENST00000505998 REXO2Q9Y3B8 237 aaKnown RBP7.11□□□□□ -1.27
NIPBL-205ENST00000505998 RICTORQ6R327 1708 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 CROCC2H7BZ55 1655 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 CAPN8A6NHC0 703 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 ZNF785A8K8V0 405 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 MATN3O15232 486 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 PPFIA4O75335 1185 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 ERN1O75460 977 aaKnown RBP7.1□□□□□ -1.27
NIPBL-205ENST00000505998 NDUFA10O95299 355 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 FCER1AP12319 257 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 NR4A1P22736 598 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 PTGS2P35354 604 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 HSD11B2P80365 405 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 GPSM2P81274 684 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 OCA2Q04671 838 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 SPDYE7PQ495Y7 208 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 PPP4R4Q6NUP7 873 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 SCAMP4Q969E2 229 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 ZNF747Q9BV97 191 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 TLR10Q9BXR5 811 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 NRDE2Q9H7Z3 1164 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.1□□□□□ -1.27
NIPBL-205ENST00000505998 MAP3K2Q9Y2U5 619 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 MTO1Q9Y2Z2 717 aaKnown RBP7.1□□□□□ -1.27
NIPBL-205ENST00000505998 SAMD9LQ8IVG5 1584 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 ABCC1P33527 1531 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 GPATCH8Q9UKJ3 1502 aaKnown RBP7.1□□□□□ -1.27
NIPBL-205ENST00000505998 TCOF1Q13428 1488 aaKnown RBP7.1□□□□□ -1.27
NIPBL-205ENST00000505998 NEO1Q92859 1461 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 MIA2Q96PC5 1412 aa7.1□□□□□ -1.27
NIPBL-205ENST00000505998 KDM5CP41229 1560 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 ARHGEF5Q12774 1597 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 PRSS29PA6NIE9 313 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 KIF3BO15066 747 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 GNAI2P04899 355 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 CFIP05156 583 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 KCNJ5P48544 419 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 SOX8P57073 446 aa7.09□□□□□ -1.27
NIPBL-205ENST00000505998 EXOSC9Q06265 439 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms