RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 HAUS1Q96CS2 278 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 CFAP57Q96MR6 1250 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 DEFB129Q9H1M3 183 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 APOBEC3GQ9HC16 384 aaKnown RBP12.57□□□□□ -0.4
UBE3D-206ENST00000505226 CCPG1Q9ULG6 757 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 CORO1CQ9ULV4 474 aaPredicted RBP12.57□□□□□ -0.4
UBE3D-206ENST00000505226 GOLGA8SH3BPF8 625 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 GOLGA8MH3BSY2 632 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 CA4P22748 312 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 ALDH1B1P30837 517 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 GPX6P59796 221 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 NOMO3P69849 1222 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 ZNF252P-AS1Q0IIN9 211 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 GPS1Q13098 491 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 MTM1Q13496 603 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 DGKZQ13574 1117 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 CC2D2BQ6DHV5 1058 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 ZBED8Q8IZ13 594 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 AGGF1Q8N302 714 aaeCLIP12.57□□□□□ -0.4
UBE3D-206ENST00000505226 RIBC1Q8N443 379 aaPredicted RBP12.57□□□□□ -0.4
UBE3D-206ENST00000505226 BBOF1Q8ND07 529 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 EXD1Q8NHP7 514 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 ZNF75CPQ92670 426 aaPredicted RBP12.57□□□□□ -0.4
UBE3D-206ENST00000505226 MASTLQ96GX5 879 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 FAM81BQ96LP2 452 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 NUDCD1Q96RS6 583 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 IWS1Q96ST2 819 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 C10orf88Q9H8K7 445 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.57□□□□□ -0.4
UBE3D-206ENST00000505226 MYBL1P10243 752 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 EIF2AK2P19525 551 aaKnown RBP12.57□□□□□ -0.4
UBE3D-206ENST00000505226 GCKP35557 465 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 PEX19P40855 299 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 TDRD10Q5VZ19 366 aaKnown RBP12.57□□□□□ -0.4
UBE3D-206ENST00000505226 MTDHQ86UE4 582 aaKnown RBP12.57□□□□□ -0.4
UBE3D-206ENST00000505226 NLRX1Q86UT6 975 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 ANKMY2Q8IV38 441 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 INPP5DQ92835 1189 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 ZNF622Q969S3 477 aaKnown RBP eCLIP12.57□□□□□ -0.4
UBE3D-206ENST00000505226 TAAR1Q96RJ0 339 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 VPS37BQ9H9H4 285 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 KMT5AQ9NQR1 393 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 HOMER2Q9NSB8 354 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 ZNF148Q9UQR1 794 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 WDR91A4D1P6 747 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 TLR3O15455 904 aaKnown RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 VNN1O95497 513 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 GTF2H1P32780 548 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 CAP2P40123 477 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 PTGER2P43116 358 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 FKBP1AP62942 108 aaKnown RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 AOC3Q16853 763 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 PLEKHA7Q6IQ23 1121 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 LVRNQ6Q4G3 990 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 ALLCQ8N6M5 410 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 RFWD2Q8NHY2 731 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 ZNF483Q8TF39 744 aaPredicted RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 SLITRK1Q96PX8 696 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 WDR83Q9BRX9 315 aaKnown RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 MOV10L1Q9BXT6 1211 aaKnown RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 NPHS2Q9NP85 383 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 UBN1Q9NPG3 1134 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 EXOC7Q9UPT5 735 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 CLUHO75153 1309 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 DPPA5A6NC42 116 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 KRT4P19013 534 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 ADRA1DP25100 572 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 PTDSS1P48651 473 aaKnown RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 SLC18A1P54219 525 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 OVGP1Q12889 678 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 DMP1Q13316 513 aaPredicted RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 MSS51Q4VC12 460 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 GPD1LQ8N335 351 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 ENDOVQ8N8Q3 282 aaKnown RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 LRRC8CQ8TDW0 803 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 PRR11Q96HE9 360 aaPredicted RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 SMC6Q96SB8 1091 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 LBHD1Q9BQE6 289 aaPredicted RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 NTPCRQ9BSD7 190 aaKnown RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 TMEM121Q9BTD3 319 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 OSBPL1AQ9BXW6 950 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 C1orf112Q9NSG2 853 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 SAE1Q9UBE0 346 aaPredicted RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 HERC5Q9UII4 1024 aaKnown RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 IVNS1ABPQ9Y6Y0 642 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 HNRNPDLO14979 420 aaKnown RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 ALOX15BO15296 676 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 ZNF862O60290 1169 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 ICAM1P05362 532 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 ATF7P17544 494 aaPredicted RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 PSMC5P62195 406 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 KHDC1Q4VXA5 237 aaKnown RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 FAM182AQ5T1J6 154 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 RNASEH2BQ5TBB1 312 aaKnown RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 CCDC125Q86Z20 511 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 CPXCR1Q8N123 301 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 LARGE2Q8N3Y3 721 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 SYTL5Q8TDW5 730 aaPredicted RBP12.56□□□□□ -0.4
UBE3D-206ENST00000505226 ASAP3Q8TDY4 903 aa12.56□□□□□ -0.4
UBE3D-206ENST00000505226 YDJCA8MPS7 323 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms