RNA–Protein interactions for RNA: ENST00000504805.6

RUFY3-207, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 5

Gene RUFY3, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-207ENST00000504805 LRPAP1P30533 357 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 MCM4P33991 863 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 PRCPP42785 496 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 SERPINB4P48594 390 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 GLUD2P49448 558 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 ERVFC1P60507 584 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 TFAMQ00059 246 aaKnown RBP7.83□□□□□ -1.16
RUFY3-207ENST00000504805 CREMQ03060 361 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 LRRC63Q05C16 580 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 CYP24A1Q07973 514 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 HYAL1Q12794 435 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 MORC3Q14149 939 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 CLUL1Q15846 466 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 ZBTB6Q15916 424 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 EDRF1Q3B7T1 1238 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 USP41Q3LFD5 358 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 SPATA1Q5VX52 437 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 CEP135Q66GS9 1140 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 ISM2Q6H9L7 571 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 USP37Q86T82 979 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 RETREG3Q86VR2 466 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 WDR49Q8IV35 697 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 RNF168Q8IYW5 571 aaPredicted RBP7.83□□□□□ -1.16
RUFY3-207ENST00000504805 ZSWIM2Q8NEG5 633 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 CACTINQ8WUQ7 758 aaKnown RBP7.83□□□□□ -1.16
RUFY3-207ENST00000504805 TMEM174Q8WUU8 243 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 ANKRD36BP1Q96IX9 119 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 CDCA3Q99618 268 aaPredicted RBP7.83□□□□□ -1.16
RUFY3-207ENST00000504805 VN1R3Q9BXE9 311 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 PDE11AQ9HCR9 933 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 MRPL17Q9NRX2 175 aaKnown RBP7.83□□□□□ -1.16
RUFY3-207ENST00000504805 DPP3Q9NY33 737 aa7.83□□□□□ -1.16
RUFY3-207ENST00000504805 R3HCC1Q9Y3T6 440 aaKnown RBP7.83□□□□□ -1.16
RUFY3-207ENST00000504805 BICDL2A1A5D9 508 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 ARHGEF37A1IGU5 675 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 C2CD2LO14523 706 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 NCK2O43639 380 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 CXCL14O95715 111 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 EFEMP2O95967 443 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 TNNC2P02585 160 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 SRGAP2BP0DMP2 458 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 DLATP10515 647 aaKnown RBP7.82□□□□□ -1.16
RUFY3-207ENST00000504805 TNNI1P19237 187 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 PTMSP20962 102 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 PAX3P23760 479 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 GTF2F1P35269 517 aaKnown RBP eCLIP7.82□□□□□ -1.16
RUFY3-207ENST00000504805 NRIP1P48552 1158 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 WNT7BP56706 349 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 DSG1Q02413 1049 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 TCF15Q12870 199 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 ADAM9Q13443 819 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 SMAD4Q13485 552 aaKnown RBP7.82□□□□□ -1.16
RUFY3-207ENST00000504805 PSMD6Q15008 389 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 PTPN14Q15678 1187 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 ZCWPW2Q504Y3 356 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 FAM171A1Q5VUB5 890 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 C9orf57Q5W0N0 161 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 PDXDC1Q6P996 788 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 LYPD8Q6UX82 237 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.82□□□□□ -1.16
RUFY3-207ENST00000504805 ADGRD2Q7Z7M1 963 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 RBM23Q86U06 439 aaKnown RBP7.82□□□□□ -1.16
RUFY3-207ENST00000504805 CEP57Q86XR8 500 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 RNF135Q8IUD6 432 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 EFCAB13Q8IY85 973 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 ADSSL1Q8N142 457 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 DEPDC4Q8N2C3 294 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 MRPL43Q8N983 215 aaKnown RBP7.82□□□□□ -1.16
RUFY3-207ENST00000504805 C3orf58Q8NDZ4 430 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 FAM200AQ8TCP9 573 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 GPT2Q8TD30 523 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 GIPC2Q8TF65 315 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 CCDC127Q96BQ5 260 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 DHTKD1Q96HY7 919 aaPredicted RBP7.82□□□□□ -1.16
RUFY3-207ENST00000504805 ZNF560Q96MR9 790 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 CGRRF1Q99675 332 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 TTPALQ9BTX7 342 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 EMILIN2Q9BXX0 1053 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 GPR62Q9BZJ7 368 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 MTMR12Q9C0I1 747 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 TLE6Q9H808 572 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.82□□□□□ -1.16
RUFY3-207ENST00000504805 DMAC2Q9NW81 257 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 ITGA11Q9UKX5 1188 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 FAM50BQ9Y247 325 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 PCDHGC5Q9Y5F6 944 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 IRAK3Q9Y616 596 aa7.82□□□□□ -1.16
RUFY3-207ENST00000504805 ANO9A1A5B4 782 aa7.81□□□□□ -1.16
RUFY3-207ENST00000504805 TRIM49BA6NDI0 452 aa7.81□□□□□ -1.16
RUFY3-207ENST00000504805 C2orf71A6NGG8 1288 aa7.81□□□□□ -1.16
RUFY3-207ENST00000504805 HIDE1A8MVS5 230 aa7.81□□□□□ -1.16
RUFY3-207ENST00000504805 SYN3O14994 580 aa7.81□□□□□ -1.16
RUFY3-207ENST00000504805 CETN3O15182 167 aa7.81□□□□□ -1.16
RUFY3-207ENST00000504805 MAPK13O15264 365 aa7.81□□□□□ -1.16
RUFY3-207ENST00000504805 LINC01565O15544 149 aa7.81□□□□□ -1.16
RUFY3-207ENST00000504805 ITGB3P05106 788 aa7.81□□□□□ -1.16
RUFY3-207ENST00000504805 ADH1AP07327 375 aa7.81□□□□□ -1.16
RUFY3-207ENST00000504805 KRT19P08727 400 aa7.81□□□□□ -1.16
RUFY3-207ENST00000504805 EPB41P11171 864 aaKnown RBP7.81□□□□□ -1.16
RUFY3-207ENST00000504805 ODC1P11926 461 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms