RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.66□□□□□ -1.82
RIF1-212ENST00000498041 PPP1R3BQ86XI6 285 aa3.66□□□□□ -1.82
RIF1-212ENST00000498041 COLGALT2Q8IYK4 626 aa3.66□□□□□ -1.82
RIF1-212ENST00000498041 CFAP52Q8N1V2 620 aa3.66□□□□□ -1.82
RIF1-212ENST00000498041 LCORLQ8N3X6 602 aa3.66□□□□□ -1.82
RIF1-212ENST00000498041 MAGEB6Q8N7X4 407 aa3.66□□□□□ -1.82
RIF1-212ENST00000498041 Q8NA96 180 aa3.66□□□□□ -1.82
RIF1-212ENST00000498041 PDPRQ8NCN5 879 aa3.66□□□□□ -1.82
RIF1-212ENST00000498041 KLHDC4Q8TBB5 520 aa3.66□□□□□ -1.82
RIF1-212ENST00000498041 BRIX1Q8TDN6 353 aaKnown RBP3.66□□□□□ -1.82
RIF1-212ENST00000498041 TNPO1Q92973 898 aaKnown RBP3.66□□□□□ -1.82
RIF1-212ENST00000498041 FUBP1Q96AE4 644 aaKnown RBP3.66□□□□□ -1.82
RIF1-212ENST00000498041 NACC2Q96BF6 587 aa3.66□□□□□ -1.82
RIF1-212ENST00000498041 SLC35A4Q96G79 324 aa3.66□□□□□ -1.82
RIF1-212ENST00000498041 ACO2Q99798 780 aaKnown RBP3.66□□□□□ -1.82
RIF1-212ENST00000498041 SIK2Q9H0K1 926 aa3.66□□□□□ -1.82
RIF1-212ENST00000498041 CYP4F11Q9HBI6 524 aa3.66□□□□□ -1.82
RIF1-212ENST00000498041 GPR35Q9HC97 309 aa3.66□□□□□ -1.82
RIF1-212ENST00000498041 PCDHA1Q9Y5I3 950 aa3.66□□□□□ -1.82
RIF1-212ENST00000498041 RUSC2Q8N2Y8 1516 aa3.65□□□□□ -1.82
RIF1-212ENST00000498041 ABCC8Q09428 1581 aa3.65□□□□□ -1.82
RIF1-212ENST00000498041 A0A088AWK7 358 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 CCDC195A0A1B0GUA6 201 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 A0A1W2PS29 197 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 ZNF785A8K8V0 405 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 PRPF3O43395 683 aaKnown RBP3.65□□□□□ -1.83
RIF1-212ENST00000498041 CTNND1O60716 968 aaKnown RBP3.65□□□□□ -1.83
RIF1-212ENST00000498041 UBXN7O94888 489 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 MATN4O95460 622 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 GNAI2P04899 355 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 EGR2P11161 476 aaPredicted RBP3.65□□□□□ -1.83
RIF1-212ENST00000498041 KCNA2P16389 499 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 HTR1BP28222 390 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 PHKA1P46020 1223 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 VAV2P52735 878 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 USP14P54578 494 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 FGL2Q14314 439 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 HABP2Q14520 560 aaPredicted RBP3.65□□□□□ -1.83
RIF1-212ENST00000498041 MLC1Q15049 377 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 LAIR1Q6GTX8 287 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 Q6ZPA2 131 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 CLNKQ7Z7G1 428 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 DAAM2Q86T65 1068 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 VRK3Q8IV63 474 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 MYO1HQ8N1T3 1032 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 ZBTB34Q8NCN2 500 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 ASB10Q8WXI3 467 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 DDX17Q92841 729 aaKnown RBP3.65□□□□□ -1.83
RIF1-212ENST00000498041 RUNDC1Q96C34 613 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 PUS7Q96PZ0 661 aaKnown RBP3.65□□□□□ -1.83
RIF1-212ENST00000498041 SMOQ99835 787 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 SARS2Q9NP81 518 aaKnown RBP3.65□□□□□ -1.83
RIF1-212ENST00000498041 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.65□□□□□ -1.83
RIF1-212ENST00000498041 TBCCD1Q9NVR7 557 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 CTTNBP2NLQ9P2B4 639 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 KLHL42Q9P2K6 505 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 GABBR1Q9UBS5 961 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 TESQ9UGI8 421 aaKnown RBP3.65□□□□□ -1.83
RIF1-212ENST00000498041 CCDC88BA6NC98 1476 aa3.65□□□□□ -1.83
RIF1-212ENST00000498041 TRGV11A0A075B6L2 103 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 PRAMEF33A0A0G2JMD5 474 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 GRID2IPA4D2P6 1211 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 GOLGA6CA6NDK9 693 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 GOLGA6BA6NDN3 693 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 E7ENX8 843 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 E9PLN8 166 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 POLRMTO00411 1230 aaKnown RBP3.64□□□□□ -1.83
RIF1-212ENST00000498041 ERC2O15083 957 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 FOXN1O15353 648 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 PRAMEF10O60809 474 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 RAMP2O60895 175 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 ZFPL1O95159 310 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 AHSGP02765 367 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 GOLGA6DP0CG33 693 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 HKR1P10072 659 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 ITGAMP11215 1152 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 KRT4P19013 534 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 AVPR1BP47901 424 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 ANXA11P50995 505 aaKnown RBP3.64□□□□□ -1.83
RIF1-212ENST00000498041 ZNF135P52742 658 aaPredicted RBP3.64□□□□□ -1.83
RIF1-212ENST00000498041 INHBCP55103 352 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 NANOS3P60323 173 aaKnown RBP3.64□□□□□ -1.83
RIF1-212ENST00000498041 RPS7P62081 194 aaKnown RBP3.64□□□□□ -1.83
RIF1-212ENST00000498041 RAB1AP62820 205 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 TAP2Q03519 686 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 FPGSQ05932 587 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 SCAPQ12770 1279 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 GEN1Q17RS7 908 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 KHDC1LQ5JSQ8 128 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 EMC10Q5UCC4 262 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 SP5Q6BEB4 398 aaPredicted RBP3.64□□□□□ -1.83
RIF1-212ENST00000498041 TAPT1Q6NXT6 567 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 MRGPRGQ86SM5 289 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 GPR149Q86SP6 731 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 USP37Q86T82 979 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 LDLRAD3Q86YD5 345 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 DNAJC10Q8IXB1 793 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 NSUN7Q8NE18 718 aaKnown RBP3.64□□□□□ -1.83
RIF1-212ENST00000498041 SUPT20HQ8NEM7 779 aa3.64□□□□□ -1.83
RIF1-212ENST00000498041 PLBD2Q8NHP8 589 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms