RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 SMIM18P0DKX4 95 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 CASP4P49662 377 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 TMEM62Q0P6H9 643 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 BTG3Q14201 252 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-215ENST00000497139 C1orf146Q5VVC0 180 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 KLHDC10Q6PID8 442 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 RAPH1Q70E73 1250 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 CCDC80Q76M96 950 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 ABTB1Q969K4 478 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-215ENST00000497139 MTBPQ96DY7 904 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 TTC1Q99614 292 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 RIOX1Q9H6W3 641 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 ZNF287Q9HBT7 754 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 CHST7Q9NS84 486 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 MCM9Q9NXL9 1143 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 hCG_2014768A0A024R1R8 64 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 PLS3P13797 630 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 ZNF24P17028 368 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 OXCT1P55809 520 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 EVA1CP58658 441 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 CCNG2Q16589 344 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 MMEL1Q495T6 779 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 RBM44Q6ZP01 1051 aaKnown RBP13.69□□□□□ -0.22
VEGFA-215ENST00000497139 DNAJC10Q8IXB1 793 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 ZNF444Q8N0Y2 327 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-215ENST00000497139 MARVELD2Q8N4S9 558 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 DDI1Q8WTU0 396 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 C17orf50Q8WW18 174 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 ZHX3Q9H4I2 956 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 KCNK4Q9NYG8 393 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 PPM1HQ9ULR3 514 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 TMED5Q9Y3A6 229 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 UBE4BO95155 1302 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 MYO3BQ8WXR4 1341 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 SPECC1L-ADORA2AF8WAN1 911 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 CLPTM1O96005 669 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 CACNB1Q02641 598 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-215ENST00000497139 MECOMQ03112 1051 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 EFHC2Q5JST6 749 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 C3orf62Q6ZUJ4 267 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 KCTD17Q8N5Z5 321 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 PIGSQ96S52 555 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 OXCT2Q9BYC2 517 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-215ENST00000497139 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.68□□□□□ -0.22
VEGFA-215ENST00000497139 Q9H521 79 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 OLFML3Q9NRN5 406 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 SLC7A8Q9UHI5 535 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 TAGLN3Q9UI15 199 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 NIP7Q9Y221 180 aaKnown RBP eCLIP13.68□□□□□ -0.22
VEGFA-215ENST00000497139 PCDHB13Q9Y5F0 798 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 POTEB3A0JP26 581 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 E9PBE3 544 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 POC1B-GALNT4F8VUJ3 575 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 KLF11O14901 512 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 CASQ2O14958 399 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-215ENST00000497139 DENRO43583 198 aaKnown RBP13.68□□□□□ -0.22
VEGFA-215ENST00000497139 GAP43P17677 238 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 PIK3CAP42336 1068 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 VPS41P49754 854 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 MYL7Q01449 175 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 PTP4A2Q12974 167 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 SH3D19Q5HYK7 790 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 CYP4F22Q6NT55 531 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 POTEBQ6S5H4 581 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 BBS5Q8N3I7 341 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 NUP85Q9BW27 656 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 FBXO6Q9NRD1 293 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-215ENST00000497139 ZNHIT2Q9UHR6 403 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 ASAP1Q9ULH1 1129 aa13.68□□□□□ -0.22
VEGFA-215ENST00000497139 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.68□□□□□ -0.22
VEGFA-215ENST00000497139 SPATA31A5Q5VU36 1347 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 SPATA31A6Q5VVP1 1343 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 SPATA31A7Q8IWB4 1347 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 C15orf38-AP3S2A0A0A6YYH1 394 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 CBFA2T3O75081 653 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 LRRN2O75325 713 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 OR6B1O95007 311 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 GOLGA8HP0CJ92 632 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 KRT4P19013 534 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 ADRA1DP25100 572 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 VARSP26640 1264 aaKnown RBP13.67□□□□□ -0.22
VEGFA-215ENST00000497139 MLH1P40692 756 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 PRKD1Q15139 912 aaPredicted RBP13.67□□□□□ -0.22
VEGFA-215ENST00000497139 PCNX4Q63HM2 1172 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 ZNF804AQ7Z570 1209 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 ARPINQ7Z6K5 226 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 PRUNE1Q86TP1 453 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 RBM15BQ8NDT2 890 aaKnown RBP13.67□□□□□ -0.22
VEGFA-215ENST00000497139 MAK16Q9BXY0 300 aaKnown RBP13.67□□□□□ -0.22
VEGFA-215ENST00000497139 SAYSD1Q9NPB0 183 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.67□□□□□ -0.223e-7■■□□□ 13.5
VEGFA-215ENST00000497139 PADI4Q9UM07 663 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 STX8Q9UNK0 236 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 USP17L3A6NCW0 530 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 USP17L4A6NCW7 530 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 F5H6K3 240 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 H3BRJ5 948 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 FOXN3O00409 490 aaPredicted RBP13.67□□□□□ -0.22
VEGFA-215ENST00000497139 KLRC2P26717 231 aa13.67□□□□□ -0.22
VEGFA-215ENST00000497139 PDE1BQ01064 536 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms