RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 BHMT2Q9H2M3 363 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 PRDM13Q9H4Q3 707 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 ANKFY1Q9P2R3 1169 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 PNPLA7Q6ZV29 1317 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 GAGE12BA1L429 117 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 GAGE12HA6NDE8 117 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 F2RL2O00254 374 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 RNASET2O00584 256 aaKnown RBP5.56□□□□□ -1.52
SMC4-224ENST00000494612 SLC16A6O15403 523 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 PEX14O75381 377 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 NKX6-1P78426 367 aaPredicted RBP5.56□□□□□ -1.52
SMC4-224ENST00000494612 FGL2Q14314 439 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 RNF220Q5VTB9 566 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 CHST15Q7LFX5 561 aaPredicted RBP5.56□□□□□ -1.52
SMC4-224ENST00000494612 GDF7Q7Z4P5 450 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 PPP1R3BQ86XI6 285 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 PLXDC1Q8IUK5 500 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 SYT12Q8IV01 421 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 KIAA0319LQ8IZA0 1049 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 PCSK9Q8NBP7 692 aaKnown RBP5.56□□□□□ -1.52
SMC4-224ENST00000494612 PJA1Q8NG27 643 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 CASKIN2Q8WXE0 1202 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 TFAP2CQ92754 450 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 GSTO2Q9H4Y5 243 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 ZMAT3Q9HA38 289 aaKnown RBP5.56□□□□□ -1.52
SMC4-224ENST00000494612 AKIP1Q9NQ31 210 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 TRPM5Q9NZQ8 1165 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 CALCOCO1Q9P1Z2 691 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 POGKQ9P215 609 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 FEZ2Q9UHY8 353 aaPredicted RBP5.56□□□□□ -1.52
SMC4-224ENST00000494612 L1RE1Q9UN81 338 aa5.56□□□□□ -1.52
SMC4-224ENST00000494612 EPN1Q9Y6I3 576 aaPredicted RBP5.56□□□□□ -1.52
SMC4-224ENST00000494612 TBKBP1A7MCY6 615 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 NT5C1B-RDH14C9J2C7 533 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 FAM227AF5H4B4 570 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 PMM2O15305 246 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 PLIN1O60240 522 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 NCR1O76036 304 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 ZBED1O96006 694 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 TRIM27P14373 513 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 SLC6A2P23975 617 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 BMPR1AP36894 532 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 CLRN1P58418 232 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 SAFBQ15424 915 aaKnown RBP eCLIP5.55□□□□□ -1.52
SMC4-224ENST00000494612 BEAN1Q3B7T3 259 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 KHDC1LQ5JSQ8 128 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 ZNF362Q5T0B9 420 aaPredicted RBP5.55□□□□□ -1.52
SMC4-224ENST00000494612 CYB5RLQ6IPT4 315 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 CCSAPQ6IQ19 270 aaPredicted RBP5.55□□□□□ -1.52
SMC4-224ENST00000494612 DRICH1Q6PGQ1 229 aaPredicted RBP5.55□□□□□ -1.52
SMC4-224ENST00000494612 DARS2Q6PI48 645 aaKnown RBP5.55□□□□□ -1.52
SMC4-224ENST00000494612 SRGAP1Q7Z6B7 1085 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 LINC00476Q8WZB0 136 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 TTC17Q96AE7 1141 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 FBXO34Q9NWN3 711 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 USP25Q9UHP3 1055 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 SLC45A2Q9UMX9 530 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 COX11Q9Y6N1 276 aa5.55□□□□□ -1.52
SMC4-224ENST00000494612 A0A088AWK7 358 aa5.54□□□□□ -1.52
SMC4-224ENST00000494612 PRR5-ARHGAP8B1AHC4 643 aa5.54□□□□□ -1.52
SMC4-224ENST00000494612 TEX33O43247 280 aa5.54□□□□□ -1.52
SMC4-224ENST00000494612 HDCP19113 662 aa5.54□□□□□ -1.52
SMC4-224ENST00000494612 PEX2P28328 305 aa5.54□□□□□ -1.52
SMC4-224ENST00000494612 PRDX5P30044 214 aa5.54□□□□□ -1.52
SMC4-224ENST00000494612 SLC6A4P31645 630 aa5.54□□□□□ -1.52
SMC4-224ENST00000494612 AGFG1P52594 562 aaKnown RBP5.54□□□□□ -1.52
SMC4-224ENST00000494612 NOMO3P69849 1222 aa5.54□□□□□ -1.52
SMC4-224ENST00000494612 EXOSC9Q06265 439 aaKnown RBP5.54□□□□□ -1.52
SMC4-224ENST00000494612 HLTFQ14527 1009 aaKnown RBP eCLIP5.54□□□□□ -1.52
SMC4-224ENST00000494612 ATXN7L2Q5T6C5 722 aaPredicted RBP5.54□□□□□ -1.52
SMC4-224ENST00000494612 PAPD7Q5XG87 772 aaKnown RBP5.54□□□□□ -1.52
SMC4-224ENST00000494612 OTUD7BQ6GQQ9 843 aa5.54□□□□□ -1.52
SMC4-224ENST00000494612 MAEAQ7L5Y9 396 aa5.54□□□□□ -1.52
SMC4-224ENST00000494612 MTFMTQ96DP5 389 aaKnown RBP5.54□□□□□ -1.52
SMC4-224ENST00000494612 COQ10AQ96MF6 247 aa5.54□□□□□ -1.52
SMC4-224ENST00000494612 TEX101Q9BY14 249 aa5.54□□□□□ -1.52
SMC4-224ENST00000494612 ATP6V0A4Q9HBG4 840 aa5.54□□□□□ -1.52
SMC4-224ENST00000494612 ALG13Q9NP73 1137 aaKnown RBP5.54□□□□□ -1.52
SMC4-224ENST00000494612 SARS2Q9NP81 518 aaKnown RBP5.54□□□□□ -1.52
SMC4-224ENST00000494612 CLCA2Q9UQC9 943 aa5.54□□□□□ -1.52
SMC4-224ENST00000494612 USP19O94966 1318 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 A0A1W2PPL8 197 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 NDUFA10O95299 355 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 ARIH2O95376 493 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 POMCP01189 267 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 SNRPA1P09661 255 aaKnown RBP5.53□□□□□ -1.52
SMC4-224ENST00000494612 TYRP1P17643 537 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 KCNJ5P48544 419 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 PSMC1P62191 440 aaKnown RBP5.53□□□□□ -1.52
SMC4-224ENST00000494612 UBXN2BQ14CS0 331 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 ATP2B3Q16720 1220 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 BMT2Q1RMZ1 405 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 PABPC1LQ4VXU2 614 aaKnown RBP5.53□□□□□ -1.52
SMC4-224ENST00000494612 CCDC93Q567U6 631 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 UTP14CQ5TAP6 766 aaKnown RBP5.53□□□□□ -1.52
SMC4-224ENST00000494612 EFCAB12Q6NXP0 572 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 APOA5Q6Q788 366 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 MED25Q71SY5 747 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 SKAP1Q86WV1 359 aa5.53□□□□□ -1.52
SMC4-224ENST00000494612 LRTOMTQ8WZ04 291 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms