RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 NECAB2Q7Z6G3 386 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 RMDN1Q96DB5 314 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 PABPC5Q96DU9 382 aaKnown RBP15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 CFAP57Q96MR6 1250 aa15.16■□□□□ 0.02
ARHGEF39-205ENST00000490638 EPHB4P54760 987 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 NAB2Q15742 525 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 SLAIN1Q8ND83 568 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 MAML3Q96JK9 1138 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 HSD17B14Q9BPX1 270 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 ZNF214Q9UL59 606 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 HES2Q9Y543 173 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 A0A087X0B3 334 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 DUSP11O75319 330 aaKnown RBP15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 SLMAPQ14BN4 828 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 ITPRIPL1Q6GPH6 555 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 VSIG1Q86XK7 387 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 IFNL1Q8IU54 200 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 ASAP3Q8TDY4 903 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 CFAP36Q96G28 342 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 CHORDC1Q9UHD1 332 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 FOXP2O15409 715 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 FARP2O94887 1054 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 CA4P22748 312 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 SLC12A3P55017 1021 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 BRSK2Q8IWQ3 736 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 CYP3A43Q9HB55 503 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 ATRNL1Q5VV63 1379 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 PPP1R12AO14974 1030 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 ATMINO43313 823 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 AOC2O75106 756 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 S100BP04271 92 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 MRPS6P82932 125 aaKnown RBP15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 IL31Q6EBC2 164 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 SDCCAG8Q86SQ7 713 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 DDX53Q86TM3 631 aaKnown RBP15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 MAP4K3Q8IVH8 894 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 OR6P1Q8NGX9 317 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 OSBPL9Q96SU4 736 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 DDX43Q9NXZ2 648 aaKnown RBP15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 TRPM5Q9NZQ8 1165 aa15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 RGS17Q9UGC6 210 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF39-205ENST00000490638 EXOC1LA0A1B0GW35 172 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 A6NNZ2 444 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 MAFO75444 373 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 MX2P20592 715 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 SLCO1A2P46721 670 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 ARL4CP56559 192 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 PRKCZQ05513 592 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 TUBB8Q3ZCM7 444 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 CDKL3Q8IVW4 592 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 ETNPPLQ8TBG4 499 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 EXOC4Q96A65 974 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 TBK1Q9UHD2 729 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 DPP7Q9UHL4 492 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 TRAF3IP3Q9Y228 551 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 NOC2LQ9Y3T9 749 aaKnown RBP15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 GOLGA8MH3BSY2 632 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 ACAT1P24752 427 aaKnown RBP15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 ATICP31939 592 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 KRT33BQ14525 404 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 C1orf54Q8WWF1 131 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 RNPC3Q96LT9 517 aaKnown RBP15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 SYT15Q9BQS2 421 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 IRX2Q9BZI1 471 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 PLAGL2Q9UPG8 496 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 LACTBL1A8MY62 500 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 APOL1O14791 398 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 ASGR1P07306 291 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 ROR1Q01973 937 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 PTPN11Q06124 597 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 KCNA1Q09470 495 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 C2CD6Q53TS8 623 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 MAGEB5Q9BZ81 275 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 ITGA11Q9UKX5 1188 aa15.14■□□□□ 0.01
ARHGEF39-205ENST00000490638 RNF40O75150 1001 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 ACSL3O95573 720 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 GJB1P08034 283 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 ATP1A2P50993 1020 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 PPTC7Q8NI37 304 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 PPM1EQ8WY54 764 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 DLG5Q8TDM6 1919 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 MT-ND3P03897 115 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 GPD1P21695 349 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 KLRC2P26717 231 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 CD52P31358 61 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 SCNN1GP51170 649 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 EIF3EP60228 445 aaKnown RBP15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 GPS1Q13098 491 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 TC2NQ8N9U0 490 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 RIN2Q8WYP3 895 aaPredicted RBP15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 PGLYRP2Q96PD5 576 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 SAYSD1Q9NPB0 183 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 ABCF3Q9NUQ8 709 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 FAM208AQ9UK61 1670 aaKnown RBP15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 IGKV6D-41A0A0C4DH26 115 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 M0QYT0 321 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 SEPT4O43236 478 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 PAMP19021 973 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 RAP1GAPP47736 663 aa15.13■□□□□ 0.01
ARHGEF39-205ENST00000490638 BCAT1P54687 386 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms