RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 PTPRZ1P23471 2315 aaPredicted RBP7.3□□□□□ -1.24
LRCH3-216ENST00000481048 KLF18A0A0U1RQI7 1052 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 GOLGA8AA7E2F4 631 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 GOLGA8BA8MQT2 603 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 IPO5O00410 1097 aaKnown RBP7.29□□□□□ -1.24
LRCH3-216ENST00000481048 PRPF3O43395 683 aaKnown RBP7.29□□□□□ -1.24
LRCH3-216ENST00000481048 MBTPS2O43462 519 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 RPS6KA5O75582 802 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 ITGB1P05556 798 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 CIITAP33076 1130 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 CRYBB1P53674 252 aaPredicted RBP7.29□□□□□ -1.24
LRCH3-216ENST00000481048 CDC42EP1Q00587 391 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 HYAL1Q12794 435 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 COASYQ13057 564 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 SMAD4Q13485 552 aaKnown RBP7.29□□□□□ -1.24
LRCH3-216ENST00000481048 EP400NLQ6ZTU2 488 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 PLA2G4DQ86XP0 818 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 RAB11FIP4Q86YS3 637 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 KIAA0319LQ8IZA0 1049 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 EFHBQ8N7U6 833 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 RSPH1Q8WYR4 309 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 CDCA3Q99618 268 aaPredicted RBP7.29□□□□□ -1.24
LRCH3-216ENST00000481048 RNF32Q9H0A6 362 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 MIR1-1HGQ9H1L0 117 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 TRIT1Q9H3H1 467 aaKnown RBP7.29□□□□□ -1.24
LRCH3-216ENST00000481048 ERVK-5Q9HDB9 667 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 RGS18Q9NS28 235 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 TCEAL9Q9UHQ7 104 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 RAPGEFL1Q9UHV5 662 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 CD207Q9UJ71 328 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 CEP131Q9UPN4 1083 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 PCDHB12Q9Y5F1 795 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 PCDHA10Q9Y5I2 948 aa7.29□□□□□ -1.24
LRCH3-216ENST00000481048 IGLV3-22A0A075B6J6 115 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 DENND3A2RUS2 1198 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 B8ZZF3 427 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 C9IYK1 514 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 FAM86B1E9PN63 330 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 PRRG2O14669 202 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 EPB41L2O43491 1005 aaKnown RBP7.28□□□□□ -1.24
LRCH3-216ENST00000481048 CDC45O75419 566 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 CCNE2O96020 404 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 FAM86B2P0C5J1 330 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 PSMA5P28066 241 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 TMOD1P28289 359 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 GNA15P30679 374 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 METAP2P50579 478 aaKnown RBP eCLIP7.28□□□□□ -1.24
LRCH3-216ENST00000481048 IRX6P78412 446 aaPredicted RBP7.28□□□□□ -1.24
LRCH3-216ENST00000481048 FAM189BP81408 668 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 AKAP17AQ02040 695 aaKnown RBP7.28□□□□□ -1.24
LRCH3-216ENST00000481048 CAMK1Q14012 370 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 GAB4Q2WGN9 574 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 ADCK5Q3MIX3 580 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 HERC4Q5GLZ8 1057 aaPredicted RBP7.28□□□□□ -1.24
LRCH3-216ENST00000481048 SWSAP1Q6NVH7 229 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 AGMOQ6ZNB7 445 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 CCDC60Q8IWA6 550 aaPredicted RBP7.28□□□□□ -1.24
LRCH3-216ENST00000481048 CKAP2LQ8IYA6 745 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 FAM177A1Q8N128 213 aaPredicted RBP7.28□□□□□ -1.24
LRCH3-216ENST00000481048 REXO1Q8N1G1 1221 aaKnown RBP7.28□□□□□ -1.24
LRCH3-216ENST00000481048 CCDC148Q8NFR7 591 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 DNAJB8Q8NHS0 232 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 TRAPPC12Q8WVT3 735 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 POF1BQ8WVV4 589 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 LINC01599Q8WXQ3 324 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 FAM167AQ96KS9 214 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 ADAM2Q99965 735 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 ZNF577Q9BSK1 485 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 AGXT2Q9BYV1 514 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 C22orf23Q9BZE7 217 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 TMX1Q9H3N1 280 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 ALG13Q9NP73 1137 aaKnown RBP7.28□□□□□ -1.24
LRCH3-216ENST00000481048 SH3GLB2Q9NR46 395 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 NRBP2Q9NSY0 501 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 TMEM161AQ9NX61 479 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 PUF60Q9UHX1 559 aaKnown RBP7.28□□□□□ -1.24
LRCH3-216ENST00000481048 ST3GAL5Q9UNP4 418 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 LZTS1Q9Y250 596 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 MRPL42Q9Y6G3 142 aaKnown RBP7.28□□□□□ -1.24
LRCH3-216ENST00000481048 NID2Q14112 1375 aa7.28□□□□□ -1.24
LRCH3-216ENST00000481048 NCANO14594 1321 aa7.27□□□□□ -1.24
LRCH3-216ENST00000481048 NUAK1O60285 661 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 GPR32O75388 356 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 C22orf31O95567 290 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 INHBBP09529 407 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 ZSCAN20P17040 1043 aaPredicted RBP7.27□□□□□ -1.25
LRCH3-216ENST00000481048 ATF7P17544 494 aaPredicted RBP7.27□□□□□ -1.25
LRCH3-216ENST00000481048 SFNP31947 248 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 HSPA4P34932 840 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 NDUFV1P49821 464 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 LIG3P49916 1009 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 EVCP57679 992 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 LINC00310P59036 64 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 DLX2Q07687 328 aaPredicted RBP7.27□□□□□ -1.25
LRCH3-216ENST00000481048 TMEM62Q0P6H9 643 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 SPOUT1Q5T280 376 aaKnown RBP7.27□□□□□ -1.25
LRCH3-216ENST00000481048 JAKMIP3Q5VZ66 844 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 BLOC1S2Q6QNY1 142 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 TMEM184AQ6ZMB5 413 aa7.27□□□□□ -1.25
LRCH3-216ENST00000481048 BMP8AQ7Z5Y6 402 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms