RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 RASA2Q15283 850 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 ZYXQ15942 572 aaKnown RBP10.38□□□□□ -0.75
COL13A1-207ENST00000478219 TBC1D9BQ66K14 1250 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 LLGL2Q6P1M3 1020 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 ZBTB8BQ8NAP8 495 aaPredicted RBP10.38□□□□□ -0.75
COL13A1-207ENST00000478219 GSTCDQ8NEC7 633 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 LMO3Q8TAP4 145 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 HAUS1Q96CS2 278 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 PRICKLE1Q96MT3 831 aaPredicted RBP10.38□□□□□ -0.75
COL13A1-207ENST00000478219 OSBPL8Q9BZF1 889 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 MAF1Q9H063 256 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 UBE2TQ9NPD8 197 aaPredicted RBP10.38□□□□□ -0.75
COL13A1-207ENST00000478219 TOGARAM1Q9Y4F4 1720 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 RBM47A0AV96 593 aaKnown RBP10.38□□□□□ -0.75
COL13A1-207ENST00000478219 ESYT2A0FGR8 921 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 SLC16A3O15427 465 aaKnown RBP10.38□□□□□ -0.75
COL13A1-207ENST00000478219 ETS1P14921 441 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 VCLP18206 1134 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 CYP2J2P51589 502 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 SULT2A1Q06520 285 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 MED21Q13503 144 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 BTG3Q14201 252 aaPredicted RBP10.38□□□□□ -0.75
COL13A1-207ENST00000478219 UGT2A3Q6UWM9 527 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 NOP9Q86U38 636 aaKnown RBP10.38□□□□□ -0.75
COL13A1-207ENST00000478219 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.38□□□□□ -0.75
COL13A1-207ENST00000478219 ZNF398Q8TD17 642 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 USP6NLQ92738 828 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 TTC25Q96NG3 672 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 LZTS2Q9BRK4 669 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 TRIM55Q9BYV6 548 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 FHDC1Q9C0D6 1143 aaPredicted RBP10.38□□□□□ -0.75
COL13A1-207ENST00000478219 MANSC1Q9H8J5 431 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 PTTG2Q9NZH5 202 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 CIDEBQ9UHD4 219 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 SRCAPQ6ZRS2 3230 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 LAMB2P55268 1798 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 MEI4A8MW99 385 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 F8W8V4 182 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 DNAJC6O75061 913 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 SPATA31C1P0DKV0 1188 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 SLC18A1P54219 525 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 CYP4A11Q02928 519 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 C1orf146Q5VVC0 180 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 CCDC62Q6P9F0 684 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 SLC30A10Q6XR72 485 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 CLEC10AQ8IUN9 316 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 MAP7D3Q8IWC1 876 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 CEP70Q8NHQ1 597 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 ZFP28Q8NHY6 868 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 DGCR14Q96DF8 476 aaKnown RBP10.37□□□□□ -0.75
COL13A1-207ENST00000478219 CEP95Q96GE4 821 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 OXNAD1Q96HP4 312 aaPredicted RBP10.37□□□□□ -0.75
COL13A1-207ENST00000478219 VPS37BQ9H9H4 285 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 KDM3AQ9Y4C1 1321 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 CCDC160A6NGH7 325 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 MAGEC1O60732 1142 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 UQCRBP14927 111 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 AP2B1P63010 937 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 PDE1BQ01064 536 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 GAD2Q05329 585 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 GK3PQ14409 553 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 KRT72Q14CN4 511 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 PDK3Q15120 406 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 GRIK5Q16478 980 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 NADK2Q4G0N4 442 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 C2CD6Q53TS8 623 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 CAVIN4Q5BKX8 364 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 SYDE2Q5VT97 1194 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 KLHL35Q6PF15 583 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 NET1Q7Z628 596 aaPredicted RBP10.37□□□□□ -0.75
COL13A1-207ENST00000478219 ZNF554Q86TJ5 538 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 SLC47A2Q86VL8 602 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 CATSPER2Q96P56 530 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 TSSK1BQ9BXA7 367 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 ZNF395Q9H8N7 513 aaPredicted RBP10.37□□□□□ -0.75
COL13A1-207ENST00000478219 ZNF711Q9Y462 761 aa10.37□□□□□ -0.75
COL13A1-207ENST00000478219 ZNFX1Q9P2E3 1918 aaKnown RBP10.37□□□□□ -0.75
COL13A1-207ENST00000478219 SMIM31A0A1B0GVY4 71 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 KDM4FA0A1W2PPD8 638 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 CAPN14A8MX76 684 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 TXNDC9O14530 226 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 TM7SF2O76062 418 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 MTA2O94776 668 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 ABHD2P08910 425 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 RALAP11233 206 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 PIM1P11309 404 aaPredicted RBP10.36□□□□□ -0.75
COL13A1-207ENST00000478219 PSMC2P35998 433 aaKnown RBP10.36□□□□□ -0.75
COL13A1-207ENST00000478219 RGS2P41220 211 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 MYL7Q01449 175 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 PDIA2Q13087 525 aaKnown RBP10.36□□□□□ -0.75
COL13A1-207ENST00000478219 TCEAL1Q15170 157 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 MYLK3Q32MK0 819 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 KLC3Q6P597 504 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 B3GNT6Q6ZMB0 384 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 TRIM67Q6ZTA4 783 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 SLC51AQ86UW1 340 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 RELL1Q8IUW5 271 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 ANKMY2Q8IV38 441 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 MAPKAPK5Q8IW41 473 aa10.36□□□□□ -0.75
COL13A1-207ENST00000478219 CCDC110Q8TBZ0 833 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms