RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 KLRC1P26715 233 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 SERPINB3P29508 390 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 PHKA1P46020 1223 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 WNT3P56703 355 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 PWP2Q15269 919 aaKnown RBP6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 CSRP2Q16527 193 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 C10orf62Q5T681 223 aaPredicted RBP6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 AGAP9Q5VTM2 703 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 ERICH6BQ5W0A0 696 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 FAM160B1Q5W0V3 765 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 XRRA1Q6P2D8 792 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 C1orf228Q6PIY5 440 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 LIMS2Q7Z4I7 341 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 MYLK4Q86YV6 388 aaPredicted RBP6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 ZFPM1Q8IX07 1006 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 TMIEQ8NEW7 156 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 PNKPQ96T60 521 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 MNTQ99583 582 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 ARPC5LQ9BPX5 153 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 GPR87Q9BY21 358 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 EIF2AQ9BY44 585 aaKnown RBP6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 IMPG2Q9BZV3 1241 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 RNPEPQ9H4A4 650 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 CERS4Q9HA82 394 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 AURKAIP1Q9NWT8 199 aaPredicted RBP6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 SLC45A2Q9UMX9 530 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 TMX2Q9Y320 296 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 A0A1W2PPC4 97 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 TRIM24O15164 1050 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 PRICKLE3O43900 615 aaPredicted RBP6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 ZNF623O75123 536 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 SOAT2O75908 522 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 RECQL4O94761 1208 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 SPATA31D3P0C874 917 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 ACO1P21399 889 aaKnown RBP6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 SLC6A2P23975 617 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 VIPR2P41587 438 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 SLC11A2P49281 568 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 SATB1Q01826 763 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 ZNF844Q08AG5 666 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 CTBP1Q13363 440 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 CRB2Q5IJ48 1285 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 FAM209BQ5JX69 171 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 SPTY2D1Q68D10 685 aaPredicted RBP6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 SPATA31D4Q6ZUB0 917 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 BEND5Q7L4P6 421 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 PPP1R32Q7Z5V6 425 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 MICU3Q86XE3 530 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 CCDC33Q8N5R6 958 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 ATP11CQ8NB49 1132 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 PCSK9Q8NBP7 692 aaKnown RBP6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 SLC17A8Q8NDX2 589 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 Q8TCH9 128 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 MAML1Q92585 1016 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 RBM15Q96T37 977 aaKnown RBP eCLIP6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 CHMP4AQ9BY43 222 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 TRMT13Q9NUP7 481 aaKnown RBP6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 ATP11BQ9Y2G3 1177 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 LRCH1Q9Y2L9 728 aa6.14□□□□□ -1.43
GAPVD1-211ENST00000467707 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 KLRG2A4D1S0 409 aaPredicted RBP6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 M0QYG6 137 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 APOL1O14791 398 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 THAP12O43422 761 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 INMTO95050 263 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 ANXA2P07355 339 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 HIBADHP31937 336 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 RPS16P62249 146 aaKnown RBP6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 NHLH2Q02577 135 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 STK3Q13188 491 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 CNGB1Q14028 1251 aaPredicted RBP6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 GRAMD1BQ3KR37 738 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 C3orf38Q5JPI3 329 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 FAM102AQ5T9C2 384 aaPredicted RBP6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 C1QL3Q5VWW1 255 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 SYT12Q8IV01 421 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 DNAJC5GQ8N7S2 189 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 RNF152Q8N8N0 203 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 PDPRQ8NCN5 879 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 IQCDQ96DY2 449 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 SNX22Q96L94 193 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 SMOQ99835 787 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 SPATA5L1Q9BVQ7 753 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 FNIP2Q9P278 1114 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 MYO1AQ9UBC5 1043 aa6.13□□□□□ -1.43
GAPVD1-211ENST00000467707 CLCA1A8K7I4 914 aa6.12□□□□□ -1.43
GAPVD1-211ENST00000467707 E7ENX8 843 aa6.12□□□□□ -1.43
GAPVD1-211ENST00000467707 F8W8V4 182 aa6.12□□□□□ -1.43
GAPVD1-211ENST00000467707 PYCARD-AS1I3L0S3 204 aa6.12□□□□□ -1.43
GAPVD1-211ENST00000467707 MT-ND5P03915 603 aa6.12□□□□□ -1.43
GAPVD1-211ENST00000467707 HTRA4P83105 476 aaPredicted RBP6.12□□□□□ -1.43
GAPVD1-211ENST00000467707 TAP2Q03519 686 aa6.12□□□□□ -1.43
GAPVD1-211ENST00000467707 SLFN5Q08AF3 891 aa6.12□□□□□ -1.43
GAPVD1-211ENST00000467707 CHAF1AQ13111 956 aaPredicted RBP6.12□□□□□ -1.43
GAPVD1-211ENST00000467707 NOMO2Q5JPE7 1267 aa6.12□□□□□ -1.43
GAPVD1-211ENST00000467707 HIBCHQ6NVY1 386 aaPredicted RBP6.12□□□□□ -1.43
GAPVD1-211ENST00000467707 Q6ZSN1 163 aa6.12□□□□□ -1.43
GAPVD1-211ENST00000467707 CFAP52Q8N1V2 620 aa6.12□□□□□ -1.43
GAPVD1-211ENST00000467707 ZNF808Q8N4W9 903 aaPredicted RBP6.12□□□□□ -1.43
GAPVD1-211ENST00000467707 SLC15A4Q8N697 577 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms