RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 GDAP1Q8TB36 358 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 FEZF2Q8TBJ5 459 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 TRAPPC12Q8WVT3 735 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 CENPTQ96BT3 561 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 PARVAQ9NVD7 372 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 NINJ2Q9NZG7 142 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 DNPEPQ9ULA0 475 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 IVNS1ABPQ9Y6Y0 642 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 PSTPIP1O43586 416 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 PGK2P07205 417 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 CETPP11597 493 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 TBXAS1P24557 533 aaPredicted RBP11.04□□□□□ -0.64
UFD1-206ENST00000466373 CNGA2Q16280 664 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 ZNF568Q3ZCX4 644 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 ANKRD20A8PQ5CZ79 823 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 MFSD7Q6UXD7 560 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 PHF13Q86YI8 300 aaPredicted RBP11.04□□□□□ -0.64
UFD1-206ENST00000466373 APOBEC3FQ8IUX4 373 aaKnown RBP11.04□□□□□ -0.64
UFD1-206ENST00000466373 CCDC197Q8NCU1 140 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 C3orf20Q8ND61 904 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 MAIP1Q8WWC4 291 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 TMEM109Q9BVC6 243 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 NIFKQ9BYG3 293 aaKnown RBP11.04□□□□□ -0.64
UFD1-206ENST00000466373 ADAM33Q9BZ11 813 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 STMN4Q9H169 189 aaPredicted RBP11.04□□□□□ -0.64
UFD1-206ENST00000466373 NRBP2Q9NSY0 501 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 NXF1Q9UBU9 619 aaKnown RBP11.04□□□□□ -0.64
UFD1-206ENST00000466373 ZNF148Q9UQR1 794 aa11.04□□□□□ -0.64
UFD1-206ENST00000466373 SOWAHBA6NEL2 793 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 KRT1P04264 644 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 OGDHQ02218 1023 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 VGLL4Q14135 290 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 CCNG2Q16589 344 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 TMEM132AQ24JP5 1023 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 GPAT2Q6NUI2 795 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 TRIM72Q6ZMU5 477 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 KATNAL2Q8IYT4 538 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 CNPY4Q8N129 248 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 TAB3Q8N5C8 712 aaPredicted RBP11.03□□□□□ -0.64
UFD1-206ENST00000466373 CEP120Q8N960 986 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 MRRFQ96E11 262 aaKnown RBP11.03□□□□□ -0.64
UFD1-206ENST00000466373 CISHQ9NSE2 258 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 SAE1Q9UBE0 346 aaPredicted RBP11.03□□□□□ -0.64
UFD1-206ENST00000466373 SCINQ9Y6U3 715 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 GOLGA8SH3BPF8 625 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 HGSO14964 777 aaPredicted RBP11.03□□□□□ -0.64
UFD1-206ENST00000466373 CSDE1O75534 798 aaKnown RBP11.03□□□□□ -0.64
UFD1-206ENST00000466373 ASS1P00966 412 aaKnown RBP11.03□□□□□ -0.64
UFD1-206ENST00000466373 PIGRP01833 764 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 MMP8P22894 467 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 MAN1A1P33908 653 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 ZNF252P-AS1Q0IIN9 211 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 MTM1Q13496 603 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 HSDL1Q3SXM5 330 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 GADL1Q6ZQY3 521 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 RHPN2Q8IUC4 686 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 DNERQ8NFT8 737 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 TFAP2BQ92481 460 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 PPP1R16BQ96T49 567 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 C10orf88Q9H8K7 445 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 TJP2Q9UDY2 1190 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 KCNG1Q9UIX4 513 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 GGA2Q9UJY4 613 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 MSCO60682 206 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 ARIH2O95376 493 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 IFNB1P01574 187 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 ICAM3P32942 547 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 RAP1GAPP47736 663 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 SCTRP47872 440 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 MNAT1P51948 309 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 DYNLT1P63172 113 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 PLCB3Q01970 1234 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 C1QBPQ07021 282 aaKnown RBP11.03□□□□□ -0.64
UFD1-206ENST00000466373 LAMTOR4Q0VGL1 99 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 TRPC3Q13507 836 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 MPP2Q14168 576 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 TARBP2Q15633 366 aaKnown RBP11.03□□□□□ -0.64
UFD1-206ENST00000466373 ZKSCAN8Q15776 578 aaPredicted RBP11.03□□□□□ -0.64
UFD1-206ENST00000466373 SMTNL2Q2TAL5 461 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 TNFAIP8L3Q5GJ75 292 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 FAM182AQ5T1J6 154 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 TMEM63BQ5T3F8 832 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 MFSD5Q6N075 450 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 DNAJC24Q6P3W2 148 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 ARMC9Q7Z3E5 817 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 BRSK2Q8IWQ3 736 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 SRRM1Q8IYB3 904 aaKnown RBP11.03□□□□□ -0.64
UFD1-206ENST00000466373 CCDC89Q8N998 374 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 EXD1Q8NHP7 514 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 NLRP4Q96MN2 994 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 RBM15Q96T37 977 aaKnown RBP eCLIP11.03□□□□□ -0.643e-15■□□□□ 9.5
UFD1-206ENST00000466373 ROPN1BQ9BZX4 212 aaPredicted RBP11.03□□□□□ -0.64
UFD1-206ENST00000466373 ROPN1Q9HAT0 212 aaPredicted RBP11.03□□□□□ -0.64
UFD1-206ENST00000466373 FGFR1OP2Q9NVK5 253 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 HAUS2Q9NVX0 235 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 SAMD15Q9P1V8 674 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 NEU2Q9Y3R4 380 aa11.03□□□□□ -0.64
UFD1-206ENST00000466373 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.03□□□□□ -0.64
UFD1-206ENST00000466373 LRRD1A4D1F6 860 aa11.02□□□□□ -0.65
UFD1-206ENST00000466373 TCP11X1B4DZS4 312 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms