RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 MRI1Q9BV20 369 aa5.47□□□□□ -1.53
LRCH3-211ENST00000466054 LSM14BQ9BX40 385 aaKnown RBP5.47□□□□□ -1.53
LRCH3-211ENST00000466054 VSTM5A8MXK1 200 aa5.46□□□□□ -1.54
LRCH3-211ENST00000466054 MGAT1P26572 445 aa5.46□□□□□ -1.54
LRCH3-211ENST00000466054 MAP2K6P52564 334 aa5.46□□□□□ -1.54
LRCH3-211ENST00000466054 CREMQ03060 361 aa5.46□□□□□ -1.54
LRCH3-211ENST00000466054 NOGQ13253 232 aa5.46□□□□□ -1.54
LRCH3-211ENST00000466054 KHDC1Q4VXA5 237 aaKnown RBP5.46□□□□□ -1.54
LRCH3-211ENST00000466054 FBXO18Q8NFZ0 1043 aa5.46□□□□□ -1.54
LRCH3-211ENST00000466054 ZNF778Q96MU6 729 aa5.46□□□□□ -1.54
LRCH3-211ENST00000466054 CGRRF1Q99675 332 aa5.46□□□□□ -1.54
LRCH3-211ENST00000466054 C11orf54Q9H0W9 315 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-211ENST00000466054 OBP2AQ9NY56 170 aa5.46□□□□□ -1.54
LRCH3-211ENST00000466054 STXBP5LQ9Y2K9 1186 aa5.46□□□□□ -1.54
LRCH3-211ENST00000466054 WNT10BO00744 389 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 TUSC2O75896 110 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 UBXN7O94888 489 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 SPDEFO95238 335 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 ALDH2P05091 517 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 MTHFD1P11586 935 aaKnown RBP5.45□□□□□ -1.54
LRCH3-211ENST00000466054 ALAS1P13196 640 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 MALP21145 153 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 MPLP40238 635 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 PABPC1LQ4VXU2 614 aaKnown RBP5.45□□□□□ -1.54
LRCH3-211ENST00000466054 ANKS6Q68DC2 871 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 KRTAP5-11Q6L8G4 156 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 DGKHQ86XP1 1220 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 XYLT1Q86Y38 959 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 Q8N9P0 234 aaPredicted RBP5.45□□□□□ -1.54
LRCH3-211ENST00000466054 ZBTB34Q8NCN2 500 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 NLGN4YQ8NFZ3 816 aaPredicted RBP5.45□□□□□ -1.54
LRCH3-211ENST00000466054 SLC35B2Q8TB61 432 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 TFAP2CQ92754 450 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 RAB24Q969Q5 203 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 WDCPQ9H6R7 721 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 FAM204AQ9H8W3 233 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 SIDT1Q9NXL6 827 aaKnown RBP5.45□□□□□ -1.54
LRCH3-211ENST00000466054 POGKQ9P215 609 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 GABBR1Q9UBS5 961 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 MAP3K2Q9Y2U5 619 aa5.45□□□□□ -1.54
LRCH3-211ENST00000466054 FAM227AF5H4B4 570 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 POMCP01189 267 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 FDXRP22570 491 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 SMARCA1P28370 1054 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 ZNF280AP59817 542 aaPredicted RBP5.44□□□□□ -1.54
LRCH3-211ENST00000466054 RESTQ13127 1097 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 SNAPC2Q13487 334 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 CCDC157Q569K6 752 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 ATXN7L2Q5T6C5 722 aaPredicted RBP5.44□□□□□ -1.54
LRCH3-211ENST00000466054 ARMC6Q6NXE6 501 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 EFCAB12Q6NXP0 572 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 SLC4A10Q6U841 1118 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 HEATR3Q7Z4Q2 680 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 SRGAP1Q7Z6B7 1085 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 GRASPQ7Z6J2 395 aaPredicted RBP5.44□□□□□ -1.54
LRCH3-211ENST00000466054 DCBLD1Q8N8Z6 715 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 IL17RDQ8NFM7 739 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 OR10H5Q8NGA6 315 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 KLHDC4Q8TBB5 520 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 ANKS1AQ92625 1134 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 MTFMTQ96DP5 389 aaKnown RBP5.44□□□□□ -1.54
LRCH3-211ENST00000466054 VRK1Q99986 396 aaPredicted RBP5.44□□□□□ -1.54
LRCH3-211ENST00000466054 C1QTNF7Q9BXJ2 289 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 TEX101Q9BY14 249 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 TMEM60Q9H2L4 133 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 SEMA4GQ9NTN9 838 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 LMBRD1Q9NUN5 540 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 GNL3LQ9NVN8 582 aaKnown RBP5.44□□□□□ -1.54
LRCH3-211ENST00000466054 LRIT1Q9P2V4 623 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 DKK2Q9UBU2 259 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 SLC23A1Q9UHI7 598 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 FEZ2Q9UHY8 353 aaPredicted RBP5.44□□□□□ -1.54
LRCH3-211ENST00000466054 RUVBL1Q9Y265 456 aaKnown RBP5.44□□□□□ -1.54
LRCH3-211ENST00000466054 NR2E3Q9Y5X4 410 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 FPGT-TNNI3KV9GXZ4 949 aa5.44□□□□□ -1.54
LRCH3-211ENST00000466054 A0A088AWK7 358 aa5.43□□□□□ -1.54
LRCH3-211ENST00000466054 NT5C1B-RDH14C9J2C7 533 aa5.43□□□□□ -1.54
LRCH3-211ENST00000466054 FOSP01100 380 aaPredicted RBP5.43□□□□□ -1.54
LRCH3-211ENST00000466054 CD1AP06126 327 aa5.43□□□□□ -1.54
LRCH3-211ENST00000466054 EGR2P11161 476 aaPredicted RBP5.43□□□□□ -1.54
LRCH3-211ENST00000466054 TYRP14679 529 aa5.43□□□□□ -1.54
LRCH3-211ENST00000466054 HTR1BP28222 390 aa5.43□□□□□ -1.54
LRCH3-211ENST00000466054 AGFG1P52594 562 aaKnown RBP5.43□□□□□ -1.54
LRCH3-211ENST00000466054 KRTAP10-6P60371 365 aaPredicted RBP5.43□□□□□ -1.54
LRCH3-211ENST00000466054 NKX6-1P78426 367 aaPredicted RBP5.43□□□□□ -1.54
LRCH3-211ENST00000466054 ANO6Q4KMQ2 910 aa5.43□□□□□ -1.54
LRCH3-211ENST00000466054 PDCD4Q53EL6 469 aaKnown RBP5.43□□□□□ -1.54
LRCH3-211ENST00000466054 ZNF529Q6P280 563 aa5.43□□□□□ -1.54
LRCH3-211ENST00000466054 CHST15Q7LFX5 561 aaPredicted RBP5.43□□□□□ -1.54
LRCH3-211ENST00000466054 OVCH2Q7RTZ1 564 aa5.43□□□□□ -1.54
LRCH3-211ENST00000466054 C1QL2Q7Z5L3 287 aa5.43□□□□□ -1.54
LRCH3-211ENST00000466054 PNPOQ9NVS9 261 aa5.43□□□□□ -1.54
LRCH3-211ENST00000466054 ABCF2Q9UG63 623 aa5.43□□□□□ -1.54
LRCH3-211ENST00000466054 PCDHA3Q9Y5H8 950 aa5.43□□□□□ -1.54
LRCH3-211ENST00000466054 PNPLA7Q6ZV29 1317 aa5.43□□□□□ -1.54
LRCH3-211ENST00000466054 LRRC14BA6NHZ5 514 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 GRM6O15303 877 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 PRC1O43663 620 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 HRGP04196 525 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 RAP2BP61225 183 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms