RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CYP2C9P11712 490 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 TNFSF4P23510 183 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 SERPINB3P29508 390 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 WNT3P56703 355 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 FMO1Q01740 532 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 HHEXQ03014 270 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 TNFAIP2Q03169 654 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 PIGFQ07326 219 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 ZNF543Q08ER8 600 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 CHAF1AQ13111 956 aaPredicted RBP3.69□□□□□ -1.82
HDAC6-212ENST00000461608 SLC13A2Q13183 592 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 DUSP8Q13202 625 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 GRM7Q14831 915 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 BEND5Q7L4P6 421 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 POLNQ7Z5Q5 900 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 SDR16C5Q8N3Y7 309 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 ST8SIA2Q92186 375 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 TFAP2CQ92754 450 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 TRIM43Q96BQ3 446 aaPredicted RBP3.69□□□□□ -1.82
HDAC6-212ENST00000461608 IQCDQ96DY2 449 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 TBCBQ99426 244 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 DPYSL5Q9BPU6 564 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 HERPUD2Q9BSE4 406 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 CNPPD1Q9BV87 410 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 C1orf43Q9BWL3 253 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 MEGF9Q9H1U4 602 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.69□□□□□ -1.82
HDAC6-212ENST00000461608 HECAQ9UBI9 543 aaPredicted RBP3.69□□□□□ -1.82
HDAC6-212ENST00000461608 ST6GALNAC2Q9UJ37 374 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 PCDHA6Q9UN73 950 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 NEU2Q9Y3R4 380 aa3.69□□□□□ -1.82
HDAC6-212ENST00000461608 A0A1W2PPC4 97 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 KLRG2A4D1S0 409 aaPredicted RBP3.68□□□□□ -1.82
HDAC6-212ENST00000461608 POM121BA6NF01 834 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 F5H423 210 aaPredicted RBP3.68□□□□□ -1.82
HDAC6-212ENST00000461608 MYO1CO00159 1063 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 BTN3A1O00481 513 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 SOAT2O75908 522 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 FGF18O76093 207 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 AHSGP02765 367 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 ANXA2P07355 339 aaKnown RBP3.68□□□□□ -1.82
HDAC6-212ENST00000461608 GJB1P08034 283 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 VIPR2P41587 438 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 SUMO3P55854 103 aaPredicted RBP3.68□□□□□ -1.82
HDAC6-212ENST00000461608 EXOSC9Q06265 439 aaKnown RBP3.68□□□□□ -1.82
HDAC6-212ENST00000461608 FSTL1Q12841 308 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 RAPGEF1Q13905 1077 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 FHL2Q14192 279 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 CDSNQ15517 529 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 AMOTQ4VCS5 1084 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 FAM83BQ5T0W9 1011 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 EFCAB12Q6NXP0 572 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 GPRIN1Q7Z2K8 1008 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 LIMS2Q7Z4I7 341 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 SESTD1Q86VW0 696 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 GPR135Q8IZ08 494 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 Q8N1X5 172 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 CCDC33Q8N5R6 958 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 GIMAP8Q8ND71 665 aaPredicted RBP3.68□□□□□ -1.82
HDAC6-212ENST00000461608 MDGA1Q8NFP4 955 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 FBXO18Q8NFZ0 1043 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 SMCR8Q8TEV9 937 aaPredicted RBP3.68□□□□□ -1.82
HDAC6-212ENST00000461608 NUP133Q8WUM0 1156 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 STON2Q8WXE9 905 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 PPM1EQ8WY54 764 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 MIEF2Q96C03 454 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 LTV1Q96GA3 475 aaPredicted RBP3.68□□□□□ -1.82
HDAC6-212ENST00000461608 CPPED1Q9BRF8 314 aaPredicted RBP3.68□□□□□ -1.82
HDAC6-212ENST00000461608 PLA2G12BQ9BX93 195 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 WDR12Q9GZL7 423 aaKnown RBP3.68□□□□□ -1.82
HDAC6-212ENST00000461608 A1CFQ9NQ94 594 aaKnown RBP3.68□□□□□ -1.82
HDAC6-212ENST00000461608 PLA2G3Q9NZ20 509 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 GPRC5BQ9NZH0 403 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 TCAF1Q9Y4C2 921 aa3.68□□□□□ -1.82
HDAC6-212ENST00000461608 A0A087WWL8 130 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 hCG_1642624A0A1W2PR95 340 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 ZNF785A8K8V0 405 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 APOL1O14791 398 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 HNRNPDLO14979 420 aaKnown RBP3.67□□□□□ -1.82
HDAC6-212ENST00000461608 ADAMTS3O15072 1205 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 CCP110O43303 1012 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 GRPP07492 148 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 PIM1P11309 404 aaPredicted RBP3.67□□□□□ -1.82
HDAC6-212ENST00000461608 MYL4P12829 197 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 PPM1AP35813 382 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 TECP42680 631 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 RAP2BP61225 183 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 NOMO3P69849 1222 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 ICA1Q05084 483 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 TCF15Q12870 199 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 UBXN2BQ14CS0 331 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 ELAVL1Q15717 326 aaKnown RBP3.67□□□□□ -1.82
HDAC6-212ENST00000461608 FAM209BQ5JX69 171 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 NAIF1Q69YI7 327 aaPredicted RBP3.67□□□□□ -1.82
HDAC6-212ENST00000461608 ERAP2Q6P179 960 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 USP17L6PQ6QN14 398 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 CATSPERGQ6ZRH7 1159 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 TAX1BP1Q86VP1 789 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 YAF2Q8IY57 180 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 RNF152Q8N8N0 203 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms