RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 TPM4P67936 248 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CTAG1AP78358 180 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SMAD4Q13485 552 aaKnown RBP6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TAF12Q16514 161 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 GEN1Q17RS7 908 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 HSF5Q4G112 596 aaPredicted RBP6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CCDC183Q5T5S1 534 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 GPAT2Q6NUI2 795 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 LPCAT2Q7L5N7 544 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 GALNT7Q86SF2 657 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SIRT2Q8IXJ6 389 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SMYD4Q8IYR2 804 aaPredicted RBP6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 LRRC71Q8N4P6 559 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ZNF527Q8NB42 609 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 GOLGA5Q8TBA6 731 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SLC16A10Q8TF71 515 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 USP13Q92995 863 aaPredicted RBP6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PRAM1Q96QH2 718 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PPP1R16BQ96T49 567 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 NAP1L3Q99457 506 aaPredicted RBP6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 KCNJ15Q99712 375 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 VCPKMTQ9H867 229 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 MCM9Q9NXL9 1143 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 LCMT1Q9UIC8 334 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PADI4Q9UM07 663 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 MINPP1Q9UNW1 487 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 YTHDC2Q9H6S0 1430 aaKnown RBP6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 H0Y626 953 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 AP3B1O00203 1094 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CACNB4O00305 520 aaPredicted RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 GOSR1O95249 250 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PCP11498 1178 aaKnown RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 IFNGR1P15260 489 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SULT1E1P49888 294 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SLC16A1P53985 500 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 LAPTM5Q13571 262 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PRKG1Q13976 671 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 POLD3Q15054 466 aaPredicted RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 KRTCAP3Q53RY4 240 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 KAZNQ674X7 775 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 GPR139Q6DWJ6 353 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CAVIN1Q6NZI2 390 aaKnown RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SEPT14Q6ZU15 432 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 INTS8Q75QN2 995 aaKnown RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 DYMQ7RTS9 669 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SPATA2LQ8IUW3 424 aaPredicted RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 NUP93Q8N1F7 819 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PCYOX1LQ8NBM8 494 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 FBXO18Q8NFZ0 1043 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TEKT4Q8WW24 435 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 FCRL3Q96P31 734 aaPredicted RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PIGSQ96S52 555 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SLF1Q9BQI6 1058 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ASCC2Q9H1I8 757 aaPredicted RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TNMDQ9H2S6 317 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 MSRAQ9UJ68 235 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 EDARQ9UNE0 448 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PTPRMP28827 1452 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CLTCQ00610 1675 aaKnown RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 NEURL1BA8MQ27 555 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 DVL2O14641 736 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 LILRB5O75023 590 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 RTN2O75298 545 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 LRRN2O75325 713 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ZNF254O75437 659 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 BAG4O95429 457 aaKnown RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TPM1P09493 284 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 MYCLP12524 364 aaPredicted RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ATP1A3P13637 1013 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 MTHFD2P13995 350 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PTX3P26022 381 aaPredicted RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TPP2P29144 1249 aaPredicted RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CLCN2P51788 898 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SLC5A3P53794 718 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 JAM2P57087 298 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 DEUP1Q05D60 604 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ADCY2Q08462 1091 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ODF2Q5BJF6 829 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 RAB12Q6IQ22 244 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CRTC3Q6UUV7 619 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PLEKHM3Q6ZWE6 761 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 MAEAQ7L5Y9 396 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CCDC170Q8IYT3 715 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 VWA5B2Q8N398 1253 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TCP11L2Q8N4U5 519 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ESX1Q8N693 406 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 LINC00469Q8N7U9 141 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SLC30A5Q8TAD4 765 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ZSCAN18Q8TBC5 510 aaPredicted RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 NOC3LQ8WTT2 800 aaKnown RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SHC3Q92529 594 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 LRRC45Q96CN5 670 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CGRRF1Q99675 332 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 HERC2P3Q9BVR0 1158 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TMPRSS13Q9BYE2 586 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ZMAT4Q9H898 229 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SENP2Q9HC62 589 aa6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 INTS10Q9NVR2 710 aaKnown RBP6.32□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ZC3H7BQ9UGR2 993 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms