RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ZNF784Q8NCA9 323 aaPredicted RBP17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 CABS1Q96KC9 395 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 SLC2A3P11169 496 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 WEE1P30291 646 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 YWHAHQ04917 246 aaPredicted RBP17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 CUL2Q13617 745 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 SLC18A3Q16572 532 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 ZNF720Q7Z2F6 126 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 SPIRE2Q8WWL2 714 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 MAML3Q96JK9 1138 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 PGLYRP2Q96PD5 576 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 KBTBD4Q9NVX7 518 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 KLHL14Q9P2G3 628 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 AP3B1O00203 1094 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 BTNL9Q6UXG8 535 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 PALB2Q86YC2 1186 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 GIMAP7Q8NHV1 300 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 SCG3Q8WXD2 468 aaKnown RBP17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 CPA5Q8WXQ8 436 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 MMTAG2Q9BU76 263 aaKnown RBP17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 MED4Q9NPJ6 270 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 AP1G2O75843 785 aa17.27■□□□□ 0.35
SMARCA4-201ENST00000344626 MX2P20592 715 aa17.27■□□□□ 0.35
SMARCA4-201ENST00000344626 PPARDQ03181 441 aa17.27■□□□□ 0.35
SMARCA4-201ENST00000344626 TAF1BQ53T94 588 aaPredicted RBP17.27■□□□□ 0.35
SMARCA4-201ENST00000344626 CBWD2Q8IUF1 395 aa17.27■□□□□ 0.35
SMARCA4-201ENST00000344626 FBXO32Q969P5 355 aa17.27■□□□□ 0.35
SMARCA4-201ENST00000344626 TRPM5Q9NZQ8 1165 aa17.27■□□□□ 0.35
SMARCA4-201ENST00000344626 ZNF142P52746 1687 aaPredicted RBP17.27■□□□□ 0.35
SMARCA4-201ENST00000344626 EXOC1LA0A1B0GW35 172 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 GRID2IPA4D2P6 1211 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 PI4K2BG5E9Z4 385 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 MBL2P11226 248 aaPredicted RBP17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 NFE2Q16621 373 aaPredicted RBP17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 OVOS1Q6IE37 1185 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 MMS22LQ6ZRQ5 1243 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 CHSY1Q86X52 802 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 UBA3Q8TBC4 463 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 CATSPERBQ9H7T0 1116 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 RPTORQ8N122 1335 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 GPAT2Q6NUI2 795 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 ASAP3Q8TDY4 903 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 MAF1Q9H063 256 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 RNPEPQ9H4A4 650 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.26■□□□□ 0.356e-8■■■■□ 22.5
SMARCA4-201ENST00000344626 BFARQ9NZS9 450 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 NRXN3Q9Y4C0 1643 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 PRR23AA6NEV1 266 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 CHRNA3P32297 505 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 NDUFV1P49821 464 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 RASSF2P50749 326 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 MRPS6P82932 125 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 RBM23Q86U06 439 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 SAPCD2Q86UD0 394 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 OLFML3Q9NRN5 406 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 CICQ96RK0 1608 aaPredicted RBP17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 PSMD3O43242 534 aa17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 CELF4Q9BZC1 486 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-201ENST00000344626 A0A1W2PQJ5 194 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 PPP1R2P1Q96PQ5 205 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 FHOD1Q9Y613 1164 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 MAP3K7O43318 606 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 EIF3BP55884 814 aaKnown RBP17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 SPOPLQ6IQ16 392 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 TTC23LQ6PF05 361 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 PPFIBP2Q8ND30 876 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 CBWD1Q9BRT8 395 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 TTI1O43156 1089 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 OAS2P29728 719 aaKnown RBP17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 CCDC15Q0P6D6 951 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 TMED2Q15363 201 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 ZNF296Q8WUU4 475 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 MUC3BQ9H195 1237 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 ITGA11Q9UKX5 1188 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 KRT37O76014 449 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 GNRH1P01148 92 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 ORC1Q13415 861 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 HSDL1Q3SXM5 330 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 KLHDC7AQ5VTJ3 777 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 ACOT1Q86TX2 421 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 ADGRF2Q8IZF7 708 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 NFASCO94856 1347 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 CLGNO14967 610 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 VDRP11473 427 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 SLC9A1P19634 815 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 CCL14Q16627 93 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 DCAF6Q58WW2 860 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.25■□□□□ 0.352e-7■■■□□ 14.8
SMARCA4-201ENST00000344626 CYP3A43Q9HB55 503 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 RBPJLQ9UBG7 517 aa17.25■□□□□ 0.35
SMARCA4-201ENST00000344626 PPP1R3GB7ZBB8 358 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 SLITRK3O94933 977 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 TAC1P20366 129 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 RASAL3Q86YV0 1011 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 ATP6V0D2Q8N8Y2 350 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 ATP9AO75110 1047 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 PPM1LQ5SGD2 360 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 IL31Q6EBC2 164 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 SLC30A5Q8TAD4 765 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms