RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 SPATC1Q76KD6 591 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 ZNF720Q7Z2F6 126 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 TMEM173Q86WV6 379 aaPredicted RBP11.18□□□□□ -0.62
TPM3-207ENST00000341372 CEP120Q8N960 986 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 C7orf25Q9BPX7 421 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 PLCD4Q9BRC7 762 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 APOL6Q9BWW8 343 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 DNAJB4Q9UDY4 337 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 ZNF232Q9UNY5 417 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 EFEMP2O95967 443 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 PFKFB1P16118 471 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 ALDH7A1P49419 539 aaKnown RBP11.18□□□□□ -0.62
TPM3-207ENST00000341372 RNASELQ05823 741 aaKnown RBP11.18□□□□□ -0.62
TPM3-207ENST00000341372 NOLC1Q14978 699 aaKnown RBP eCLIP11.18□□□□□ -0.62
TPM3-207ENST00000341372 NAB2Q15742 525 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 PDE12Q6L8Q7 609 aaKnown RBP11.18□□□□□ -0.62
TPM3-207ENST00000341372 MICALL1Q8N3F8 863 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 BCL7CQ8WUZ0 217 aaPredicted RBP11.18□□□□□ -0.62
TPM3-207ENST00000341372 IGSF21Q96ID5 467 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 HAPLN2Q9GZV7 340 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 ZHX3Q9H4I2 956 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 TLR9Q9NR96 1032 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 USP25Q9UHP3 1055 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 PLAAQ9Y263 795 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 CDK2AP1O14519 115 aa11.17□□□□□ -0.62
TPM3-207ENST00000341372 FAM189A1O60320 539 aa11.17□□□□□ -0.62
TPM3-207ENST00000341372 SLFN14P0C7P3 912 aa11.17□□□□□ -0.62
TPM3-207ENST00000341372 ALCAMQ13740 583 aa11.17□□□□□ -0.62
TPM3-207ENST00000341372 TM4SF20Q53R12 229 aa11.17□□□□□ -0.62
TPM3-207ENST00000341372 TCEAL5Q5H9L2 206 aa11.17□□□□□ -0.62
TPM3-207ENST00000341372 SLC39A4Q6P5W5 647 aa11.17□□□□□ -0.62
TPM3-207ENST00000341372 ALKAL1Q6UXT8 129 aa11.17□□□□□ -0.62
TPM3-207ENST00000341372 CCDC65Q8IXS2 484 aa11.17□□□□□ -0.62
TPM3-207ENST00000341372 RNF168Q8IYW5 571 aaPredicted RBP11.17□□□□□ -0.62
TPM3-207ENST00000341372 ZNF295-AS1Q8N0V1 137 aa11.17□□□□□ -0.62
TPM3-207ENST00000341372 ZBTB45Q96K62 511 aaPredicted RBP11.17□□□□□ -0.62
TPM3-207ENST00000341372 CCDC94Q9BW85 323 aaPredicted RBP11.17□□□□□ -0.62
TPM3-207ENST00000341372 PHACTR1Q9C0D0 580 aa11.17□□□□□ -0.62
TPM3-207ENST00000341372 MARCH5Q9NX47 278 aa11.17□□□□□ -0.62
TPM3-207ENST00000341372 ACTR10Q9NZ32 417 aa11.17□□□□□ -0.62
TPM3-207ENST00000341372 STYXL1Q9Y6J8 313 aa11.17□□□□□ -0.62
TPM3-207ENST00000341372 SPTBN5Q9NRC6 3674 aaKnown RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 IFRD1O00458 451 aaPredicted RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 HNRNPDLO14979 420 aaKnown RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 MEFVO15553 781 aaPredicted RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 GADD45BO75293 160 aaPredicted RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 IDEP14735 1019 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 GSTT1P30711 240 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 SH3BP2P78314 561 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 KRT17Q04695 432 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 COASYQ13057 564 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 ZC2HC1CQ53FD0 456 aaPredicted RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 UBR7Q8N806 425 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 CHAC2Q8WUX2 184 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 PPM1EQ8WY54 764 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 STAMQ92783 540 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 TMEM169Q96HH4 297 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 SNX27Q96L92 541 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 FAM193BQ96PV7 902 aaPredicted RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 PPP1R10Q96QC0 940 aaKnown RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 VN1R3Q9BXE9 311 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 GBP3Q9H0R5 595 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 CXCL16Q9H2A7 254 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 MRPL44Q9H9J2 332 aaKnown RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 TOPORSQ9NS56 1045 aaPredicted RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 PANK4Q9NVE7 773 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 ANKFY1Q9P2R3 1169 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 STK39Q9UEW8 545 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 COG5Q9UP83 839 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 GDAQ9Y2T3 454 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 ANK1P16157 1881 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 A0A0B4J269 797 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 A0A1B0GVL5 298 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 NT5C1B-RDH14C9J2C7 533 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 NRP1O14786 923 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 CLDN3O15551 220 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 BPNT1O95861 308 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 MYCLP1P12525 358 aaPredicted RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 LIG4P49917 911 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 CASP5P51878 434 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 ERVFC1P60507 584 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 TUSC3Q13454 348 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 KYAT1Q16773 422 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 HERC4Q5GLZ8 1057 aaPredicted RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 L1TD1Q5T7N2 865 aaKnown RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 UNC13DQ70J99 1090 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 DDX53Q86TM3 631 aaKnown RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 BICD1Q96G01 975 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 FGFBP2Q9BYJ0 223 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 ZBP1Q9H171 429 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 TNKS2Q9H2K2 1166 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 NGRNQ9NPE2 291 aaKnown RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 PRDM6Q9NQX0 595 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 THEGQ9P2T0 379 aa11.16□□□□□ -0.62
TPM3-207ENST00000341372 PUF60Q9UHX1 559 aaKnown RBP11.16□□□□□ -0.62
TPM3-207ENST00000341372 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.15□□□□□ -0.62
TPM3-207ENST00000341372 NCK2O43639 380 aa11.15□□□□□ -0.62
TPM3-207ENST00000341372 ALDH2P05091 517 aa11.15□□□□□ -0.62
TPM3-207ENST00000341372 MYL1P05976 194 aa11.15□□□□□ -0.62
TPM3-207ENST00000341372 THP07101 528 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms